Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738845.1_202016-09-
21] 477 sequences; 12,168,513 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq5 250 3e-61
>seq5
Length=564955
Score = 250 bits (276), Expect = 3e-61
Identities = 867/1339 (65%), Gaps = 38/1339 (3%)
Strand=Plus/Plus
Query 104266 AGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACG 104324
||| || || ||| || || || || || |||||| | || ||| || | |||||
Sbjct 298340 AGATATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTT-ACTCACG 298398
Query 104325 CAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTA 104384
| | ||||| | |||||||| ||||| |||| ||| ||||||||| ||| ||| |
Sbjct 298399 CCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGG 298458
Query 104385 TCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAA 104444
| |||| ||||||||||| ||| | || || || | || | | ||| ||||| |
Sbjct 298459 TTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGA 298518
Query 104445 TCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTC 104504
| || || ||||| |||||||| | || |||||| | | | | | | |||
Sbjct 298519 TTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCTT 298578
Query 104505 GTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACG 104564
||| || ||||| ||| || | ||| | ||||| ||| |||| || || ||
Sbjct 298579 ACATTGCTGGTACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAATA 298638
Query 104565 CCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTAT 104620
||| || || ||||| | || | ||| | |||| || | | || | ||
Sbjct 298639 ACACCGCCCGTTATGTTGACCAGGGTGGTAAT-AAAAGACCTGGTGCGTTTGCCCTTTAC 298697
Query 104621 CTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGAC 104680
|| || |||||||| || ||||| | || || |||| | | ||||| ||| |
Sbjct 298698 CTGGAACCATGGCATGCTGATATATTTGATTTTATTGATATTAGGAAGAACCACGGTAAA 298757
Query 104681 GAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAA 104739
||||| | |||| | ||| | ||| | ||||| |||||||| ||||| ||||||||
Sbjct 298758 GAGGAAATTC-GTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAA 298816
Query 104740 GAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACA-AGGCACCTGGTCTCT 104798
| | || || || | ||| | ||| | | || | |||| ||| || |||||| |
Sbjct 298817 GCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCA-ACATCAGCTCCTGGTTTAA 298875
Query 104799 CCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGG 104858
|||| ||||| |||||||| || || || || |||||| |||||||||| |
Sbjct 298876 GCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCGTG 298935
Query 104859 CGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGA 104918
| ||| | ||| | | ||| | | ||| | | ||||||| || |
Sbjct 298936 ---GTAAGACTATCAAAGCCCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGAAA 298992
Query 104919 CTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATT 104978
|||||||||| | | | ||||||| || || |||||| ||| ||||||||| || |
Sbjct 298993 CTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAATCTAATCAAAAAAACT 299052
Query 104979 TGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATG 105038
| ||||| |||||| || || | || ||||| | |||| ||| |||||
Sbjct 299053 TAGGTGTCATCAAGTCATCAAACTTATGCTGTGAAATTGTTGAATACTCAGCTCCAGATG 299112
Query 105039 AGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC------------CAAGTATGTGG 105086
| || ||||| |||||| | || || | || | || | | || ||
Sbjct 299113 AAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGCATTCATTGAAACTTCTGAGG 299172
Query 105087 ATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCA 105146
|| |||| |||| | | ||||| | || ||| || | ||| ||| ||
Sbjct 299173 ATGGTAAGACTTCCACATACAACTTCAAAAAATTACATGAAATTGCTAAAGTTGTTACTC 299232
Query 105147 AAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTA 105206
|| |||||||||| |||||| | |||| ||||| ||||| || | ||||| |
Sbjct 299233 GTAATTTAAACAGAGTCATTGATCGTAATTACTACCCTGTTGAAGAAGCGAGAAAATCCA 299292
Query 105207 ATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTT 105266
|||||||||| | ||||||| | | |||||||| |||||||| || ||||| || |
Sbjct 299293 ATATGAGACATAGACCAATTGCTTTGGGTGTTCAAGGTCTCGCTGACACTTTCATGCTGT 299352
Query 105267 GTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCA 105326
|| |||||||||| || ||||| | ||| | || ||||| || |
Sbjct 299353 TACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTGCTAAATATCCAAATCTTTGAAACTA 299412
Query 105327 TGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAA 105386
| ||||| ||| | | || || || || | || || || |||||||| ||||
Sbjct 299413 TTTATCATGCCTCCATGGAAGCTTCTTGTGAACTAGCTCAGAAGGACGGTCCATACGAAA 299472
Query 105387 CCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGA 105446
| || | || ||||| ||||| ||||| | || || ||||||||||||| | | |
Sbjct 299473 CTTTCCAAGGATCTCCTGCTTCTCAAGGTATACTACAGTTTGATATGTGGG-ACCAAAAA 299531
Query 105447 CCAAGCTTCA-CTACGACTGGGAAGCTCTCAAGGAACG-CATCAAGGAGAAGGGTCTTCG 105504
|| | || | || ||||| | || ||| || | |||| | || | ||| || |
Sbjct 299532 CCCTACGGCATGTGGGATTGGGACAC-CTTAAGAAAAGATATCATGAAGCATGGTATTAG 299590
Query 105505 TAACAGTCTCCT----CATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTA 105560
|| |||| |||||| |||||||| || || ||||| | ||||| ||||||
Sbjct 299591 AAA----TTCCTTGACCATGGCACCAATGCCTACTGCATCCACATCCCAAATATTGGGTT 299646
Query 105561 ATAATGAATGCTTTGAACC 105579
|||||||||| || |||||
Sbjct 299647 ATAATGAATGTTTCGAACC 299665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583257322307480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |