Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738855.1_202016-09-
21] 898 sequences; 12,808,139 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq12 150 3e-31
seq9 114 2e-20
seq15 109 8e-19
>seq12
Length=1062538
Score = 150 bits (166), Expect = 3e-31
Identities = 176/238 (74%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| | |||||||| ||||| || |||||||| ||||| ||||| | |
Sbjct 65000 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 64941
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| || | || |||||||||||| || |||||||| || || ||||||
Sbjct 64940 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 64881
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | || ||||| || || ||| | || || || |||| | ||||||||
Sbjct 64880 CAAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 64821
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
||||| ||||| || || ||||||||||| || | || |||||||||| ||| ||
Sbjct 64820 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTATGCAAATTT 64763
Score = 132 bits (146), Expect = 7e-26
Identities = 172/238 (72%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | || || |||||||| || |||||||| ||||| ||||| |
Sbjct 64772 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 64713
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| || | ||| ||||||||||||||||||||||| || || ||||||
Sbjct 64712 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 64653
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| || | |||||||| || || ||| |||| ||| || |||| || || || ||
Sbjct 64652 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 64593
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
|| ||||| ||||| ||| | || |||| || | | |||||||||| ||| ||
Sbjct 64592 ATCCAAAAGGAATCTACTCTTCACCTGGTGTTGAGACTGAGAGGTGGTATGCAAATTT 64535
Score = 123 bits (136), Expect = 4e-23
Identities = 167/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | |||||||| ||||| || |||||||| ||||| ||||| | |
Sbjct 64544 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 64485
Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| || ||| || |||| || ||||||||||| || |||||||| || || || ||
Sbjct 64484 GACACTATTGACAACGTTAAGTCA-AAAATTCAAGACAAGGAAGGTATTCCTCCAGACCA 64426
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||||| | |||||||| || |||||| |||| ||| || |||| | || || ||
Sbjct 64425 GCAAAGATTGATTTTTGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGGACTACAA 64366
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTA 124767
||||||||| || || ||| | || | || || | || | |||||||
Sbjct 64365 TATTCAAAAGGAGTCCACTCTTCACCTCGTCTTGAGGTTGAGGGGTGGTA 64316
Score = 91.5 bits (100), Expect = 2e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || | ||||| | || || ||||| ||||| | || ||||| |
Sbjct 65456 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 65397
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || || | || |||||||||||| || |||||||| || || ||||||
Sbjct 65396 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 65337
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | || ||||| || || || |||| || || |||| | ||||| ||
Sbjct 65336 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 65277
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| || || || || || ||| | || || | || ||||||||||
Sbjct 65276 ATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTAT 65227
>seq9
Length=443577
Score = 114 bits (126), Expect = 2e-20
Identities = 158/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 124548 TTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATT 124607
||| | ||||| | || || || || || ||| | || ||||| | ||| || |||
Sbjct 77864 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 77923
Query 124608 TCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTT 124667
||| | || || |||||||| || |||||||| |||||||| |||||||| |
Sbjct 77924 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 77983
Query 124668 ATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAA 124727
|| ||||| || || ||||| || || || |||| || || || || |||||||||
Sbjct 77984 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 78043
Query 124728 GAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| |||||||| || || || | || ||||||||||
Sbjct 78044 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTAT 78084
>seq15
Length=1072352
Score = 109 bits (120), Expect = 8e-19
Identities = 358/556 (64%), Gaps = 28/556 (5%)
Strand=Plus/Plus
Query 205318 CtttttatttttaattttGGAAATGGGTTTGGTGTACGTTCTAATTGtttttttAATCCA 205377
||||| || |||| ||| || ||||| |||| | | | ||||| ||| || ||
Sbjct 466412 CTTTTAATCTTTAGTTTCGGGAATGGTCTTGGATTTCTGGAGATTTGTTCTTTCAAGGCA 466471
Query 205378 TTAATATGATTAACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTTTT 205437
| ||| || | ||| | |||||||| || | | ||||||| || ||| ||| |
Sbjct 466472 TCAATGTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACTCACCTGGCTCC 466531
Query 205438 AAATTAGTTAAATGT-GCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGG 205496
| | | || | | |||||||| |||||| ||| ||| |||| ||||| ||
Sbjct 466532 ATGTC-GACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAATGTTAAACGG 466590
Query 205497 TACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAG------------ 205544
||| || || ||||||||| || | ||| |||| | |||| |||
Sbjct 466591 TACTCCCAACCCCATATCACAAGAACGTTGGTACAATAAGCATGAAAGGCGGGGCTTACC 466650
Query 205545 --ATATTTATTATTAATT----------ACATGAAATTGTACAAAACAATGACAAGGTGG 205592
|| || | || || |||| || ||| |||| ||| || |||||
Sbjct 466651 GGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAAATATGGCATGGTGG 466710
Query 205593 TATAACCATATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTC 205652
| | |||| || |||| ||| || |||||||| | | || || ||||| |
Sbjct 466711 CAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATGATTCTTCTATCGTA 466770
Query 205653 AGGtttattttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATA 205712
|| || | || | ||||| |||| ||| | |||||||||| ||||| |||||
Sbjct 466771 GGGATTTGTCTTAAGTTTATGAATAACCTGTTTCAATTGATCAATACCTTGTCCAGTATA 466830
Query 205713 ATTTGTATC-CATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTG 205771
| ||| || || | ||||||||||||||||| | ||||||||| |||||||| |
Sbjct 466831 GTCGTCATCGCACGTCT-TGTATTTAGCACCAAAATGCCTCCATTGAAATCCATAAACGG 466889
Query 205772 GACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttATATATTTTAATGATC 205831
| || | ||| ||| |||| ||||| || || || || | || ||||| ||||
Sbjct 466890 GCCCCAGATCTCCTACTTTCCTATCTTTGAACCCCATCTTATCTAAATATTCACGAGATC 466949
Query 205832 CATTTTCATCCCAAAT 205847
|||| | ||||||||
Sbjct 466950 CATTACCGTCCCAAAT 466965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755447520006400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |