Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738855.1_202016-09- 21] 898 sequences; 12,808,139 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5 262 5e-65 seq9 138 1e-27 seq2 91.5 2e-13 >seq5 Length=569556 Score = 262 bits (290), Expect = 5e-65 Identities = 889/1367 (65%), Gaps = 36/1367 (3%) Strand=Plus/Plus Query 111627 ATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGAC 111686 ||| | ||||| | || ||||| || |||||| || ||| ||| || || || || Sbjct 304016 ATGAGAGTCGCACTAGGCATCCACGGTAGAGATATCGAGGCTGCTTTAGAAACGTATAAC 304075 Query 111687 AAGATGTCCCGTGG-TATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACC 111745 |||||| | ||| || || |||| | ||||| | ||||| || ||||| || Sbjct 304076 TTGATGTCTCTAAAATATTTTACTC-ACGCCTCTCCAACGTTGTTCAATGCCGGTACTCC 304134 Query 111746 AAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCAT 111805 || ||| ||||||||| ||||||| | |||| | |||||||| || ||| | || || Sbjct 304135 AAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGAT 304194 Query 111806 TTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCA 111865 ||||| ||| | | |||||||| || || || ||||||||||| || | || Sbjct 304195 TTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACA 304254 Query 111866 CATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGTACAAATGGTCAATCAGATG 111924 |||||| | | | | ||| || || ||| |||||||| ||| || | | Sbjct 304255 TATCCATAACATTCGTTC-AACTGGTTCTTACATTGCTGGTACAAACGGTACTTCTAACG 304313 Query 111925 GTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGC 111984 || | ||||| ||| |||| || || || ||| || || ||||| |||| | ||| Sbjct 304314 GTTTAATTCCTATGATTCGTGTTTTCAATAACACTGCCCGTTATGTTGACCAGGGTGGTA 304373 Query 111985 GTCGCAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAG 112040 | ||| || | | || | || || || |||||||| || ||||| | || Sbjct 304374 ATAA-AAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATATTTGAT 304432 Query 112041 TTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCC-GCGATCTCTTCTC 112099 || |||| | | ||||| ||| | ||||| || ||| | ||| | ||| | Sbjct 304433 TTTATTGATATTAGGAAGAACCACGGTAAAGAGGAAATTCG-TGCAAGAGATTTGTTCCC 304491 Query 112100 CGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCT 112159 ||||| |||||||| ||||| ||||||||| | || || || | ||| | ||| | | Sbjct 304492 TGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATT 304551 Query 112160 CTTTTGTCCAGACAAG-GCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCC 112218 || | |||| ||| || || ||| | |||| ||||| |||||||| || | Sbjct 304552 ATTCTCTCCA-ACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTC 304610 Query 112219 TCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGT 112278 | || || |||||| ||||| |||| | | ||| | ||| | | | Sbjct 304611 TATATACCCGCTACGAGAAAGAAGGTCGTGGTAA---GACTATCAAAGCCCAAAAATTAT 304667 Query 112279 GGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACG 112338 || | | ||| | | ||||||| || ||||||||||| | | ||||||| || | Sbjct 304668 GGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATG 304727 Query 112339 CCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTA 112398 | |||||| ||| ||||||||| || || ||||| |||||| || ||| | || Sbjct 304728 CTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCAAACTTATGCT 304787 Query 112399 CAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCG 112458 ||||| | |||| ||| |||||| || ||||| |||||| | || || | | Sbjct 304788 GTGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTG 304847 Query 112459 CTCTCCCC------------AAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 112506 | | || | | || |||| |||| |||| | | ||| Sbjct 304848 CCTTACCAGCATTCATTGAAACTTCTGAGGATGGTAAGACTTCCACATACAACTTCAAAA 304907 Query 112507 AACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATT 112566 || | || ||| || | ||| ||| || || |||||||||| |||||| | |||| Sbjct 304908 AATTACATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAATT 304967 Query 112567 TTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTG 112626 ||||| ||||| || | ||||| ||||||||||| | ||||||| | | |||| Sbjct 304968 ACTACCCTGTTGAAGAAGCGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTG 305027 Query 112627 TCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGA 112686 | ||||||||||| || ||||| || | || |||||||||| || ||||| Sbjct 305028 TTCAAGGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCC 305087 Query 112687 AGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGG 112746 | ||| | || ||||| || || ||||| ||| | | || || || | Sbjct 305088 GTTTGCTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTGTG 305147 Query 112747 AGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGG 112806 | | || || || |||||||| ||||| || | || ||||| ||||| ||||| Sbjct 305148 AACTAGCTCAGAAGGACGGTCCATACGAAACTTTCCAAGGATCTCCTGCTTCTCAAGGTA 305207 Query 112807 TGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA-CTACGACTGGGACGCTCTC 112865 | || || ||||||||||||| | | ||| | || | || |||||| | || Sbjct 305208 TACTACAGTTTGATATGTGGG-ACCAAAAACCCTACGGCATGTGGGATTGGGACAC-CTT 305265 Query 112866 AAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCA 112922 ||| || | |||| | || | ||| || | | | || || |||||||||||||| Sbjct 305266 AAGAAAAGATATCATGAAGCATGGTATTAG--AAATTCCTTGACCATGGCACCAATGCCT 305323 Query 112923 ACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 112969 || || ||||| | ||||| |||||| |||||||||| || ||||| Sbjct 305324 ACTGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTCGAACC 305370 >seq9 Length=443577 Score = 138 bits (152), Expect = 1e-27 Identities = 929/1463 (63%), Gaps = 66/1463 (5%) Strand=Plus/Minus Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTGTCTTGATG 111605 ||||| || ||||||| || ||| ||| | | ||||||| | |||| || Sbjct 249757 TATTTCGGATTCAAGACACTGGAGCGTTCGTACTTGCTAAGACTGAACGGTGAAGTGGCA 249698 Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 ||| || ||| | || | ||||| || ||| | ||||||||||| ||||| || Sbjct 249697 GAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTAGGTATCCATGGTAGCGATATCGAA 249638 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGT---GGTATGTTCATCCACGCAACACCA 111722 ||||| || |||| || | |||||| || | || |||| ||||| | ||| Sbjct 249637 TCTGTGCTGAAGACTTATAATTTGATGTC--GTTAAGATAC-TTCACTCACGCTTCCCCA 249581 Query 111723 ACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAAC 111782 || | |||||||||||||| ||| || |||||||| |||||| | ||||| | Sbjct 249580 ACTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATGTTTCTTAATTGCCATG 249521 Query 111783 AAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAG 111842 ||||| || || ||| | || ||||| | ||| | | |||||||| || || || Sbjct 249520 AAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAA 249461 Query 111843 TGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAG-TCTCGTATTAG 111901 || |||||| | || | || ||| | | || | || ||| | ||| ||| Sbjct 249460 ACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCC-ACAGGTTCTTATATCGC 249402 Query 111902 AGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 111961 ||||| || ||| ||| | || | ||||| ||| |||| || || || || || Sbjct 249401 TGGTACCAACGGTACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATACTGC 249342 Query 111962 GCGCTATGTAAACCAAGCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCTT-G 112014 || ||||| |||| | || || |||| || || |||| | | |||| | Sbjct 249341 CCGTTATGTGGACCAGGGTG---GTAACAAGACACCTGGTGCTTTCGCCCT-TTTCTTGG 249286 Query 112015 AGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGG 112074 |||||||||| || |||||| | || || | || | | | || ||| | || | Sbjct 249285 AGCCATGGCATGCAGATATCTTCGACTTTGTCGATATCAGAAAAACACATGGTAAGGAAG 249226 Query 112075 AGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGA 112133 | | |||| | ||| | ||| | ||||| ||||| || ||||| |||||||| | Sbjct 249225 AAATTC-GTGCAAGAGATTTGTTCCCTGCTCTATGGATCCCTGATCTTTTCATGAAACGT 249167 Query 112134 GTTGAGGAGAGTGGCAATTGGTCTCTCTTTT-GTCCAGACAAGGCACCCGGTCTCTCCGA 112192 ||| | ||| ||| |||| || | |||| | |||| || || ||| | || Sbjct 249166 GTTCAAGAGGATGGGCCTTGGACTTTGTTTTCGCCCAG-TGCTGCCCCAGGTTTAGATGA 249108 Query 112193 TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGAC 112252 || |||||| || ||||||| || || || ||||| |||| |||| | Sbjct 249107 TGTGTGGGGTGATGAATTTGAAGAACTATATACTCGTTACGAAAGAGAAGGTCGTG---G 249051 Query 112253 TGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCT-CAAGTCTCAAACCGAGACTG 112311 | || | ||| | ||||| | || ||| | |||| | || || || || | Sbjct 249050 TAAAACAATTAAAGCCCAAAAGTTGTGGTATGCCATTTTGCAAG-CACAGACAGAAACAG 248992 Query 112312 GTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 112371 ||||||| | ||| |||| || ||||| |||||| |||| || ||| |||| || | Sbjct 248991 GTACACCTTTCATGGTTTATAAGGACGCATGTAACAGGAAGACAAACCAACAGAACTTAG 248932 Query 112372 GTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGA 112431 || ||||| || || | ||| |||||| | |||| | | | ||||| | Sbjct 248931 GTACTATCAAATCATCTAATTTATGTTGTGAAATCGTCGAATATTCCTCCCCGGATGAAA 248872 Query 112432 CGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC--CA--AGTATGTGGATCCAGA---- 112483 | || || ||||| | || || || || || || || || || || | |||| Sbjct 248871 CTGCAGTTTGTAATTTAGCTTCTATTGCCCTACCAGCATTCGT-TGAGGTTTCAGAAGAT 248813 Query 112484 GACAAA-----GACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAA 112538 | ||| | | | ||| || | | | ||||| || | ||| | || | Sbjct 248812 GGTAAAACTGCAAGCTATAATTTCGAGAGATTACACGAGATTGCTAAAGTCATTACTCAC 248753 Query 112539 AACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCT 112595 ||| | ||||||||||| || | |||| || || ||| ||| ||| | || || Sbjct 248752 AACTTGAACAGAGTTATCGACCGTAATTACTATCCAGTTCCCGAG---GCTAGAAATTCA 248696 Query 112596 AATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTT 112655 ||||||| || | || |||| ||| |||||||| ||| | || ||| | || | Sbjct 248695 AATATGAAGCATAGACCTATTGCTCTTGGTGTCCAGGGTTTGGCCGATACTTATATGATG 248636 Query 112656 TGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATC--AATGCGCGTATATTTGAGA 112713 | || | | ||||| || || ||||| | || || || | || || || | Sbjct 248635 TTGCGTCTACCCTTTGAATCGGAAGAAGCTCA--AACTCTAAACAAACAAATCTTCGAAA 248578 Query 112714 CAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATG 112773 | || || || || ||||||| || | || ||||| | || ||| |||| Sbjct 248577 CTATTTACCATGCTACTCTTGAAGCCTCCTGTGAATTGGCCCAAAAAGAAGGTAAATATT 248518 Query 112774 AAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTG 112833 || ||||| |||||||||||||| | || | | ||||| ||||||| |||| | Sbjct 248517 CTACTTTTGAAGGTTCTCCAGCTTCTAAGGGTATTTTACAATTCGATATGT-GGAACGCT 248459 Query 112834 AGACCAAGCTTCA-CTACGACTGGGACGCTCTCAAGGAACG-CA---TCAAGGAGAAGGG 112888 | |||| || | || ||||| | || ||| || | || | || | | ||| Sbjct 248458 AAACCATTTGGCATGTGGGATTGGGAAAC-CTTAAGAAAGGACATTGTTAA--ACATGGG 248402 Query 112889 TCTTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTG 112946 | | | ||| ||||| ||||||||||||||||| ||||| || | ||||| | Sbjct 248401 T-TAAGAAAC--TCTTTGACTATGGCACCAATGCCAACCGCCTCAACTTCCCAAATTCTT 248345 Query 112947 GGTAATAATGAATGCTTTGAACC 112969 ||| ||||||||||||| ||||| Sbjct 248344 GGTTATAATGAATGCTTCGAACC 248322 >seq2 Length=810858 Score = 91.5 bits (100), Expect = 2e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 163546 CTATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGC 163605 ||| || ||| |||||||| | || || || || |||||| ||||||||||| ||||| Sbjct 713756 CTACGGTCGTATTGCGCCAAGGTCAGGCCTGGCAGTGAAAAACGGTATCCAAACCGGTGC 713815 Query 163606 GGGTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCAT 163660 |||||| | || || ||||| |||||||| ||||| ||| | ||||||||| Sbjct 713816 TGGTGTTGTCGACAGAGATTACACCGGTGAAGTTAAAGTAGTTTTATTCAATCAT 713870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620735432166560