Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738965.1_202016-09- 21] 517 sequences; 12,304,834 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5 190 3e-43 >seq5 Length=561349 Score = 190 bits (210), Expect = 3e-43 Identities = 881/1386 (64%), Gaps = 34/1386 (2%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 || ||||||| ||| ||| || || || ||||| | |||||| ||||||| |||||| Sbjct 300586 TACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGAT 300527 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATG-CGTTC 118300 || || ||||| ||||||||| | | || | | ||| | | | | || | || Sbjct 300526 GCAGTAGGCATTGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATCTTTT 300467 Query 118301 CTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAG 118360 ||| || | |||||| || | || | | | | ||||||||||||||| || Sbjct 300466 CTTAAG-GTGTCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAG 300408 Query 118361 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 118420 |||||||| || || || ||||| | || || || ||||| || || || || | Sbjct 300407 TATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTCCTTCTGAGCTAG 300348 Query 118421 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGC 118480 ||| | || || | || || ||||| || |||||||| || | ||| | Sbjct 300347 TTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAGCAA 300288 Query 118481 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 118540 ||| || || |||||||| | | || ||| || || || ||||||||||| Sbjct 300287 ACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTG 300228 Query 118541 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATA 118600 ||||| | ||||||| | |||||||||||| || || | || || || || || Sbjct 300227 AACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTA 300168 Query 118601 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 118660 |||| | ||| || || || |||| ||| || ||||| || | |||||||| | Sbjct 300167 GTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAA 300108 Query 118661 CTTTTCGTAATCAAAACTGCGAGTCT---------------CTTCATTGACATACTTAGG 118705 |||| | | | | || ||||| |||| ||| || || || Sbjct 300107 TTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGCT--GG 300051 Query 118706 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 118765 | ||| | || |||| ||||| |||| || ||||| | | | ||| || | ||| Sbjct 300050 TAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAAT 299991 Query 118766 TTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 118825 ||| ||| |||||||| ||| ||| || ||||| |||||||| || ||| |||| Sbjct 299990 TTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTT 299931 Query 118826 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 118885 ||| ||||||||||||| | | | || || || || || ||||| | | | ||| | Sbjct 299930 ACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGA 299871 Query 118886 CTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGT 118945 | ||| | | ||| | ||| || | || || |||| |||||| || Sbjct 299870 ATACCATAATTTTTGGGCTTTGATAGT---CTTACCACGACCTTCTTTCTCGTAGCGGGT 299814 Query 118946 GTAGAGGGCTTCAAACTCTTCACC--CACGGCCTCTGAGAGCCCTGGTGCCTTAT-CTGG 119002 || || || |||||||| ||||| || | || | | || || | || || ||| Sbjct 299813 ATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAA--CCAGGAG-CTGATGTTGG 299757 Query 119003 GCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 119062 |||| | | ||| ||| || || || ||||||||||| || || || ||||| Sbjct 299756 AGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCA 299697 Query 119063 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 119122 || || | ||| | ||| | ||| ||| || | || || || | | || Sbjct 299696 TAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATC 299637 Query 119123 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTAC 119181 | ||| || | ||||| || ||||| ||||||||||| | || | | ||| | Sbjct 299636 AATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCT 299577 Query 119182 GACG--ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAAT 119239 | |||| |||||| ||||| | |||||| || || ||||||| ||| ||||| Sbjct 299576 CTTGTTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAAT 299517 Query 119240 GATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTG 119299 | ||| | || || ||||| || ||| ||| | | | | | | || Sbjct 299516 TAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATG 299457 Query 119300 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 119359 ||| || | ||||||||| || || || || || || || ||| | | || | Sbjct 299456 GATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTC 299397 Query 119360 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGG 119419 ||| ||||| ||||| ||||| |||| | || | | ||| || ||||||||||| Sbjct 299396 GTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGG 299337 Query 119420 CCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTT-GGGACA 119478 | || ||||| || ||||| | ||||| | |||| || || ||| || | |||| Sbjct 299336 TTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGT-GAGTAAAATATTTTAGAGACA 299278 Query 119479 TCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCC 119538 || || || || || || | || || |||| ||||| || || | | ||| | Sbjct 299277 TCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTTTACCGTGGATGCCTAGTGCGACTC 299218 Query 119539 GCATAA 119544 ||||| Sbjct 299217 TCATAA 299212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618431203362520