Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738965.1_202016-09- 21] 517 sequences; 12,304,834 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq5 250 3e-61 >seq5 Length=561349 Score = 250 bits (276), Expect = 3e-61 Identities = 876/1355 (65%), Gaps = 42/1355 (3%) Strand=Plus/Plus Query 104252 GGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCC-AAGG 104310 || || || || |||| || || ||| || || || || || |||||| | || Sbjct 299229 GGCATCCACGGTAAAGATATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAA 299288 Query 104311 TATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTC 104370 ||| || | |||||| | ||||| | |||||||| ||||| |||| ||| |||||||| Sbjct 299289 TATTTT-ACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTC 299347 Query 104371 CAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTAC 104430 | ||| ||| | | |||| ||||||||||| ||| | || || || | || | | Sbjct 299348 CTCTTGTTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAA 299407 Query 104431 GGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAG 104490 ||| ||||| || || || ||||| |||||||| | || |||||| | | | Sbjct 299408 GGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCG 299467 Query 104491 AGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCT 104550 | | | ||| ||| || ||||| ||| || | ||| | ||||| ||| | Sbjct 299468 TTCAACTGGTTCTTACATTGCTGGTACAAACGGTACTTCTAACGGTTTAATTCCTATGAT 299527 Query 104551 TCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAGGGATCTA- 104609 ||| || || || ||| || || ||||| | || | ||| | ||| || || Sbjct 299528 TCGTGTTTTCAATAACACTGCCCGTTATGTTGACCAGGGTGG---TAACAAGAGACCTGG 299584 Query 104610 -----TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCG 104664 | || | || || || |||||||| || ||||| | || || |||| | | Sbjct 299585 TGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATATTTGATTTTATTGATATTAG 299644 Query 104665 TCTCAACCAAGGTGACGAGGAGGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTC 104723 ||||| ||| | ||||| || ||| | ||| | ||| | ||||| ||||||| Sbjct 299645 GAAGAACCACGGTAAAGAGGAAATTCG-TGCAAGAGATTTGTTCCCTGCTCTATGGATTC 299703 Query 104724 CAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACA 104783 | ||||| ||||||||| | || || || | ||| | ||| | | || | |||| ||| Sbjct 299704 CTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCA-ACA 299762 Query 104784 AG-GCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTAC 104842 || |||||| | |||| ||||| |||||||| || || || || ||| Sbjct 299763 TCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTAC 299822 Query 104843 GAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTC 104902 ||| |||||||||| | | ||| | ||| | | ||| | | ||| | Sbjct 299823 GAGAAAGAAGGTCGTGGTAA---GACTATCAAAGCCCAAAAATTATGGTATTCCATTTTG 299879 Query 104903 AAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAG 104962 | ||||||| || ||||||||||| | | | ||||||| || || |||||| ||| Sbjct 299880 GAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAA 299939 Query 104963 AGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAA 105022 ||||||||| || || ||||| |||||| || || | || ||||| | ||| Sbjct 299940 TCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCAAACTTATGCTGTGAAATTGTTGAA 299999 Query 105023 TTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCC------ 105076 | ||| |||||| || ||||| |||||| | || || | || | || Sbjct 300000 TACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGCATTC 300059 Query 105077 ------AAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTT 105130 | | || |||| |||| |||| | | ||||| | || ||| || Sbjct 300060 ATTGAAACTTCTGAGGATGGTAAGACTTCCACATACAACTTCAAAAAATTACATGAAATT 300119 Query 105131 ACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAG 105190 | ||| ||| || || |||||||||| |||||| | |||| ||||| ||||| Sbjct 300120 GCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAATTACTACCCTGTTGAA 300179 Query 105191 ACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCG 105250 || | ||||| ||||||||||| | ||||||| | | |||||||| |||||||| Sbjct 300180 GAAGCGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTGTTCAAGGTCTCGCT 300239 Query 105251 GATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCG 105310 || ||||| || | || |||||||||| || ||||| | ||| Sbjct 300240 GACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTGCTAAATATC 300299 Query 105311 CGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTT 105370 | || ||||| || || ||||| ||| | | || || || || | || || Sbjct 300300 CAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTGTGAACTAGCTCAGAAG 300359 Query 105371 GATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGAT 105430 || |||||||| ||||| || | || ||||| ||||| ||||| | || || |||||| Sbjct 300360 GACGGTCCATACGAAACTTTCCAAGGATCTCCTGCTTCTCAAGGTATACTACAGTTTGAT 300419 Query 105431 ATGTGGGAAGGTGAGACCAAGCTTCA-CTACGACTGGGAAGCTCTCAAGGAACG-CATCA 105488 ||||||| | | ||| | || | || ||||| | || ||| || | |||| Sbjct 300420 ATGTGGG-ACCAAAAACCCTACGGCATGTGGGATTGGGACAC-CTTAAGAAAAGATATCA 300477 Query 105489 AGGAGAAGGGTCTTCGTAACAGTCTCCT----CATGGCTCCAATGCCAACAGCCTCCACC 105544 | || | ||| || | || |||| |||||| |||||||| || || ||||| Sbjct 300478 TGAAGCATGGTATTAGAAA----TTCCTTGACCATGGCACCAATGCCTACTGCATCCACA 300533 Query 105545 GCACAAATCTTGGGTAATAATGAATGCTTTGAACC 105579 | ||||| |||||| |||||||||| || ||||| Sbjct 300534 TCCCAAATATTGGGTTATAATGAATGTTTCGAACC 300568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257030677080