Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738985.1_202016-09-
21] 347 sequences; 12,141,343 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq5 356 3e-93
seq10 199 5e-46
>seq5
Length=558407
Score = 356 bits (394), Expect = 3e-93
Identities = 1335/2072 (64%), Gaps = 45/2072 (2%)
Strand=Plus/Minus
Query 64835 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 64893
|||| || |||||||| | ||| ||||| | || || | | ||||||||| || || |
Sbjct 295489 CAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 295430
Query 64894 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 64953
| | || |||||||||||||||||||||| |||||||| | | || |
Sbjct 295429 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 295370
Query 64954 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 65013
|| | ||||| ||| ||| |||||| || || | | || || ||||| |
Sbjct 295369 GTAAGAACAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCATGT 295310
Query 65014 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 65072
| ||||| |||||||||| ||||||||||| ||| || || || || | ||| |||| |
Sbjct 295309 TAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCTTGT 295251
Query 65073 GGAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCT---TGATC 65126
|||| |||| || | |||||||| ||| | || ||||| || || | ||
Sbjct 295250 GGAACATTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTCATA 295194
Query 65127 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 65186
| |||| ||| | | || || | | || | | || || || || ||
Sbjct 295193 CCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACCTGG 295134
Query 65187 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 65246
||||| || || || || | || | ||| ||||| || ||||| | | | |||
Sbjct 295133 AATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACATTCA 295074
Query 65247 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 65306
|||| ||||| ||||| | || |||||||| ||||| ||||||| || ||||
Sbjct 295073 TTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT 295014
Query 65307 CTAAGACCGTATGTTCTGATTTTATCTTTTAG--AGGT-TCCCAATTCCAAAGATCCGAC 65363
|||| ||| ||| | | || |||||||| |||| ||||||| ||| | | |
Sbjct 295013 CTAATACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCGTAG 294957
Query 65364 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 65423
||| ||||| ||||| | | || |||||| |
Sbjct 294956 GGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAA 294897
Query 65424 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 65483
|| |||||||| || ||||||| ||||||||||||| || || | | | | ||||
Sbjct 294896 GTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAA 294837
Query 65484 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT 65543
|| || || ||||| | ||||||| | |||||| ||||||||| || |
Sbjct 294836 ATAGTCTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGT 294777
Query 65544 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 65603
|| || || || | ||| || | ||||||||||| | | | || |||||||||||| ||
Sbjct 294776 AACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATA 294717
Query 65604 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 65663
|| || || |||||| || ||| || |||||| ||| || | | | || | |||
Sbjct 294716 TTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAATTA 294657
Query 65664 C---TGACAATT-----ACTTTGACCACATCCTTC--AGTT---TGAGAAAATCAAATCG 65710
| | |||| | | ||| | || || |||| || | || || | |
Sbjct 294656 CGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCA 294597
Query 65711 --CTCATCTATTACAAACA-TGTTC--AATGCAACAGATGCCAGATTACAAACGGCTACC 65765
|||| || ||| | || | || ||||| || |||| |||||||| ||
Sbjct 294596 TCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTT 294537
Query 65766 TCATTAGCATCCGCATATTGTATTATCTCAGTGCA-AAGATTACTACACTTGATGGTTCC 65824
|||| | | | | |||| | || ||| ||| ||| || | |||||||| ||
Sbjct 294536 TCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATG-ACTTGATGACACC 294478
Query 65825 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACC 65884
||| |||| ||||||| ||| ||||||| |||||||| |||| || ||| || |||||
Sbjct 294477 TAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACC 294418
Query 65885 AGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTT 65944
||||||| | |||| ||| | ||| | | ||| | | | || || || || ||
Sbjct 294417 AGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGAT---AGTCTT 294361
Query 65945 GTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATT 66004
| |||| | ||||| | ||||| | || |||||||| || || ||
Sbjct 294360 ACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATC 294301
Query 66005 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 66064
| || |||||| | ||| | | || | ||| || | || | || ||
Sbjct 294300 GCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACG 294241
Query 66065 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTC 66124
||||| || |||||||||||||| ||||| || |||||||| | | | ||||||
Sbjct 294240 CTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTC 294181
Query 66125 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAA 66184
|| || ||||| ||| ||| | || | | |||||| |||||| |||||||
Sbjct 294180 TTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAG 294121
Query 66185 GTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 66244
||| | ||| | | ||||| | ||| || || ||||| || | || | || |||||
Sbjct 294120 GTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCAGTGTT 294061
Query 66245 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATA 66304
||| |||| | | ||| ||||| | ||| || || ||||| || || || | || ||
Sbjct 294060 ATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTA 294001
Query 66305 GCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 66364
||| ||| |||||| ||| || |||||| || || || || |||| || ||
Sbjct 294000 AGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAAT 293941
Query 66365 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 66424
|| || ||| || || || || || || ||||| ||| || ||| ||||| ||
Sbjct 293940 CAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAAC 293881
Query 66425 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 66484
| ||||| |||||||| | ||| || ||||| || || || ||||| ||
Sbjct 293880 CAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGC 293821
Query 66485 GTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 66544
||| ||||| ||||| ||| | | || ||||| || | ||| | || ||||| |
Sbjct 293820 GTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCT 293761
Query 66545 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-T 66603
|| || |||| |||||| | ||| | | || || || | ||| | | ||||
Sbjct 293760 ACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCA-CTTGAC 293702
Query 66604 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAA 66662
||| ||| | | || || || |||||||||||||||||||||||| |||| ||||
Sbjct 293701 CGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTGAA 293642
Query 66663 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCC 66722
|| |||| || || | ||| | ||||| | ||||||||| | || | || | ||
Sbjct 293641 AA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATATTG 293583
Query 66723 ATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAAT 66782
| | | || || || |||| | || ||| | || |||||| || | |
Sbjct 293582 TAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATCTATAA 293523
Query 66783 AAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCT 66842
| ||| || | || | | |||| ||||| | |||| ||| |||| ||| || | |||
Sbjct 293522 AGATCTTCGACAACCTTAGAAAATTGTTTTGTGGTTTGTTTATGTAAATTAGAAATGGCA 293463
Query 66843 ATTCTAGCGGCTATAATGGCATAATCCGGATG 66874
||||| || |||| |||| ||||| |||||
Sbjct 293462 ATTCTGGCCGCTAGGGTGGCGTAATCTGGATG 293431
>seq10
Length=748315
Score = 199 bits (220), Expect = 5e-46
Identities = 589/899 (66%), Gaps = 13/899 (1%)
Strand=Plus/Minus
Query 35847 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 35906
|||| |||||||| || |||||||| ||| || | |||||||| || ||||| |
Sbjct 392304 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCT 392246
Query 35907 TACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttt 35966
|||| | || || || ||||||||||||||||| || || || || || ||| |
Sbjct 392245 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 392186
Query 35967 tAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTT 36026
| || || || | || ||| || ||||| || || | ||| ||||| | |
Sbjct 392185 TGTTACCGAAAGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGT 392126
Query 36027 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT-TCTT-GTTCAAT 36084
|| ||||| |||| | |||||| | || | ||||| | |||| |||||||
Sbjct 392125 CAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCAAT 392068
Query 36085 AGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATG 36144
|| || || || | ||| | || | || ||| | | |||||
Sbjct 392067 TTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATG 392008
Query 36145 TTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTT 36204
|||| ||| ||||| || ||| ||| | ||| |||||||||| || ||||||||
Sbjct 392007 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 391948
Query 36205 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 36264
|||||| || | |||||||| | || | |||||| | ||| || ||||| ||||| ||
Sbjct 391947 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 391888
Query 36265 TCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC---- 36320
|| || || || | ||||| | | |||||||||| ||||| || ||| |||
Sbjct 391887 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCA-AACAAGG 391829
Query 36321 CGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTG 36380
|| || ||| || ||||| || |||||| |||||||||| | || || |
Sbjct 391828 CGTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGG 391769
Query 36381 TCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCA 36440
| | || ||||| || | | | |||| ||| || || | || ||||| ||||
Sbjct 391768 TGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTATCGATCA 391709
Query 36441 AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATC 36500
| | || |||| || ||||| |||||||| ||||| || ||||||||||
Sbjct 391708 ACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCT 391649
Query 36501 TAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTC 36560
| ||||| | ||| || ||||| || | || ||| | || |||||||| || || |
Sbjct 391648 TTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATAC 391589
Query 36561 CGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGT--G 36617
||||| || || ||||| || | || || ||| || | ||||| | ||
Sbjct 391588 CGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCA 391529
Query 36618 TTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATG 36677
|| || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || |
Sbjct 391528 TTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAG 391469
Query 36678 ATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 36736
| || || || || || | |||||| ||||| || | || || |||| ||||
Sbjct 391468 AAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 391410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658169945175480
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