Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739065.1_202016-09-
21] 385 sequences; 12,336,308 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq5 336 3e-87
seq10 194 2e-44
>seq5
Length=562508
Score = 336 bits (372), Expect = 3e-87
Identities = 1328/2074 (64%), Gaps = 49/2074 (2%)
Strand=Plus/Minus
Query 52804 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 52862
|||| || |||||||| | ||| ||||| | || || | | ||||||||| || || |
Sbjct 300295 CAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 300236
Query 52863 TTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTG 52922
| | || ||||||||||||||||||||||||||||||| | | || |
Sbjct 300235 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 300176
Query 52923 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 52982
|| | ||||| ||| ||| |||||| || || | | || || ||||| |
Sbjct 300175 GTAAGAACAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCATGT 300116
Query 52983 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 53041
| ||||| |||||||||| ||||||||||| ||| || || || || | ||| |||| |
Sbjct 300115 TAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCTTGT 300057
Query 53042 GGAAGGTTTG-TATTC--TGAATAGATCCACCATCTACCATAATCCTATTCT---TGATC 53095
|||| |||| || | ||||| || ||| | | ||||| || || | ||
Sbjct 300056 GGAACATTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTCATA 300000
Query 53096 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 53155
| |||| ||| | | || || | | || | | || || || || ||
Sbjct 299999 CCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACCTGG 299940
Query 53156 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 53215
||||| || || || || | || | ||| ||||| || ||||| | | | |||
Sbjct 299939 AATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACATTCA 299880
Query 53216 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 53275
|||| ||||| ||||| | || |||||||| ||||| ||||||| || ||||
Sbjct 299879 TTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT 299820
Query 53276 CTAAGACCGTATGTTCTGATTTTATCTTTTAG--AGGT-TCCCAATTCCAAAGATCCGAC 53332
|||| ||| ||| | | || |||||||| |||| ||||||| ||| | | |
Sbjct 299819 CTAATACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCGTAG 299763
Query 53333 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 53392
||| ||||| ||||| | | || |||||| |
Sbjct 299762 GGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAA 299703
Query 53393 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 53452
|| |||||||| || ||||||| ||||||||||||| || || | | | | ||||
Sbjct 299702 GTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAA 299643
Query 53453 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT 53512
|| ||||| ||||| | ||||||| | |||||| ||||||||| || |
Sbjct 299642 ATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGT 299583
Query 53513 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 53572
|| || || || | ||| || | ||||||||||| | | | || |||||||||||| ||
Sbjct 299582 AACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATA 299523
Query 53573 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTT 53632
|| || || |||||| || ||| || |||||| ||| || | | | || | ||
Sbjct 299522 TTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAATTA 299463
Query 53633 CTGACAATTACTTTGACCACATCCT-TCAGTTTGAGAAAATCAAATTGTCCATCTATTAC 53691
| || ||||| | | || | | | ||| ||| | | ||| | | ||||
Sbjct 299462 CGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTA--TGTGGAAGTCTTAC 299405
Query 53692 AAACATG------TTCAATG-------------CAATAGATGCCAGATTACAAACGGCTA 53732
| | | ||||||| ||| || |||| |||||||| ||
Sbjct 299404 CATCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAG 299345
Query 53733 CCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA-AAGATTACTACACTTGATGGTT 53791
|||| | | | | |||| | || ||| ||| ||| || | ||||||||
Sbjct 299344 TTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATG-ACTTGATGACA 299286
Query 53792 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTA 53851
||||| |||| ||||||| ||| ||||||| |||||||| |||| || ||| || |||
Sbjct 299285 CCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTA 299226
Query 53852 CCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGAT 53911
||||||||| | || | ||| | ||| | | ||| | | || || || ||
Sbjct 299225 CCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGAT---AGTC 299169
Query 53912 TTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACA 53971
|| | |||| | ||||| | ||||| | ||||||||||| || || |
Sbjct 299168 TTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAA 299109
Query 53972 TTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 54031
| | || |||||| | ||| | | || | ||| || | || | ||
Sbjct 299108 TCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACA 299049
Query 54032 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCC 54091
|| ||||| || |||||||||||||| ||||| || | |||||| | | | ||||
Sbjct 299048 CGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCC 298989
Query 54092 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 54151
|| || || ||||| ||| ||| | || | | ||||||| |||||| ||||||
Sbjct 298988 TCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCATGGTTCC 298929
Query 54152 AAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 54211
| ||| | || | | ||||| | ||| || || ||||| || | || | || |||
Sbjct 298928 AGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCAGTG 298869
Query 54212 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATA 54271
||||| |||| | | ||| ||||| | ||| || || | ||| || || || | ||
Sbjct 298868 TTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATG 298809
Query 54272 TAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAG 54331
|| ||| | | |||||| ||| || |||||| || || || || |||| ||
Sbjct 298808 TAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAA 298749
Query 54332 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTA 54391
|| || || ||| || || || || || || ||||| ||| || ||| ||||| |
Sbjct 298748 ATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCA 298689
Query 54392 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 54451
| | ||||| |||||||| | ||| || ||||| || || || |||||
Sbjct 298688 ACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAG 298629
Query 54452 GCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCC 54511
||||| ||||| ||||| ||| | | || ||||| || | ||| | || |||||
Sbjct 298628 GCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCT 298569
Query 54512 CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 54571
| || || |||| |||||| | ||| | | || || || | ||| | | ||||
Sbjct 298568 CTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCA-CTTG 298510
Query 54572 -TTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TG 54629
||| ||| | || || || || |||||||||||||||||||||||| |||| ||
Sbjct 298509 ACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTG 298450
Query 54630 AAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACAT 54689
|||| |||| || || | ||| | ||||| | ||||||||| | || | || | ||
Sbjct 298449 AAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATAT 298391
Query 54690 CCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAA 54749
| | | || || || |||| | || ||| | || |||||| || ||
Sbjct 298390 TGTAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATCTAT 298331
Query 54750 ATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGG 54809
| | ||| | | || | | |||| ||||| | |||| ||| |||| ||| || | ||
Sbjct 298330 AAAGATCTTCGACAACCTTAGAAAATTGTTTTGTGGTTTGTTTATGTAAATTAGAAATGG 298271
Query 54810 CTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843
| ||||| || ||||| |||| ||||| |||||
Sbjct 298270 CAATTCTGGCCGCTAGGGTGGCGTAATCTGGATG 298237
>seq10
Length=738268
Score = 194 bits (214), Expect = 2e-44
Identities = 589/900 (65%), Gaps = 15/900 (2%)
Strand=Plus/Minus
Query 23824 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 23883
|||| |||||||| || |||||||| ||| || | |||||||| || || || |
Sbjct 395610 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTGGTCT 395552
Query 23884 TACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGA--TTCT 23941
|||| | || || || ||||||||||||||| | || || || || ||| ||||
Sbjct 395551 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 395492
Query 23942 TTTAAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCAT 24001
| | | || || || | || ||| || ||||| ||||| | ||| ||||| |
Sbjct 395491 TGTTA--CCGAAAGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAA 395434
Query 24002 TTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT-TCTT-GTTCA 24059
||| ||||| |||| | |||||| | || | ||||| | |||| |||||
Sbjct 395433 GTCAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCA 395376
Query 24060 ATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAA 24119
|| || || || || | ||| | || | || ||| | | |||
Sbjct 395375 ATTTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAA 395316
Query 24120 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 24179
|| |||| ||| ||||| || ||| ||| | ||| |||||||||| || ||||||
Sbjct 395315 TGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCG 395256
Query 24180 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 24239
|||||||| || | |||||||| | || | |||||| | ||| || ||||| |||||
Sbjct 395255 TTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAG 395196
Query 24240 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCG 24299
|| || || || || | ||||| | | |||||||||| |||||||| ||| | |
Sbjct 395195 GAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAG 395136
Query 24300 GCG---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 24356
||| ||| || ||||| || |||||| |||||||||| | || ||
Sbjct 395135 GCGTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATG 395076
Query 24357 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 24416
|| | || ||||| || | | | |||| ||| || || | || ||||| |||
Sbjct 395075 GTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTATCGATC 395016
Query 24417 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 24476
|| | || |||| || ||||| |||||||| ||||| || ||||||||||
Sbjct 395015 AACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTC 394956
Query 24477 CTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATT 24536
| ||||| | ||| || ||||| | | || ||| | || |||||||| || ||
Sbjct 394955 TTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATA 394896
Query 24537 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT-- 24593
|||||| || || ||||| || | || || ||| || | ||| ||| ||
Sbjct 394895 CCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTC 394836
Query 24594 GTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAAT 24653
|| || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| ||
Sbjct 394835 ATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAA 394776
Query 24654 GATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 24713
|| || || || || || | |||||| ||||| || | || || |||| ||||
Sbjct 394775 GAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 394716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593718742714800
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