Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739065.1_202016-09-
21] 385 sequences; 12,336,308 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq12 167 5e-36
seq10 149 1e-30
seq11 138 3e-27
seq9 132 1e-25
>seq12
Length=1055857
Score = 167 bits (184), Expect = 5e-36
Identities = 155/197 (79%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| || || || || |||||||| | |||||||| ||||||||||| || |||
Sbjct 60247 GTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCA 60306
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | ||||||||||| ||||| || ||||||||||| |||||||| |||
Sbjct 60307 GCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATCTTACTTTTG 60366
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || ||| || ||| |||||||| || |||||||| || || || |||
Sbjct 60367 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 60426
Query 104543 TTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 60427 TTGACGAAAATTTGCAT 60443
Score = 163 bits (180), Expect = 7e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||||||| || || |||||||| || || || |||||||| || || |||
Sbjct 60670 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 60729
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || ||||||||||||||||| || || || ||||| || | || |||||||| |||
Sbjct 60730 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 60789
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || ||||| || | || || || || | ||||||| || |||
Sbjct 60790 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 60849
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || | ||| || || ||||| || | || || || || ||||||||
Sbjct 60850 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 60899
Score = 140 bits (154), Expect = 7e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || || |||||||| ||||| || || |||||||| ||||||||||| || ||
Sbjct 60019 GTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCG 60078
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | || || || || ||||| || ||||| || || ||||| || | ||
Sbjct 60079 GCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 60138
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || || || ||| |||||||| || ||||||||||| || |||||
Sbjct 60139 ACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTC 60198
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| || |||||
Sbjct 60199 TTGACAAAAATTTGCAT 60215
Score = 134 bits (148), Expect = 3e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| || || || || |||||||| | ||||||||||||||||| || || ||
Sbjct 60475 GTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCG 60534
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | |||||||||||| ||||| || ||||| || ||||| || || | ||
Sbjct 60535 GCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTA 60594
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || ||| | ||| ||||||| || || || ||||| || | ||
Sbjct 60595 ACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTC 60654
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 60655 TTAACAAAGATCTGCAT 60671
Score = 125 bits (138), Expect = 2e-23
Identities = 152/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|||| |||||||| || || || || ||||| || | ||||||||| ||||| | |||
Sbjct 495572 TGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGC 495513
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| |||||||| || | || ||||| ||||| || || ||||| || || || |||||
Sbjct 495512 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTG 495453
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| || ||||| || | || || || ||| || || || |||||||||||||| ||
Sbjct 495452 GACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTT 495393
Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563
| || || || || || ||||| |||
Sbjct 495392 AAAGTCTTGACGAAAATTTGCATCTTG 495366
>seq10
Length=738268
Score = 149 bits (164), Expect = 1e-30
Identities = 376/564 (67%), Gaps = 26/564 (5%)
Strand=Plus/Plus
Query 268745 TACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTA 268804
||||| | |||| |||||||| ||||| | |||||| | ||| ||||| | || |
Sbjct 394756 TACAAGCGTGCCGAAGCTTCTTTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATC 394815
Query 268805 ATAGATTGGAAAAATTTAA--AACCAGAA-GAAAGAAGATTTATATCTTATATTCTTGCG 268861
|| ||||| || || ||| |||| || ||| || || || |||||||
Sbjct 394816 CATGACTGGAACAACAGAATGAACGAGAACGAGAGATTTTTCATTTCCAGAGTTCTTGCC 394875
Query 268862 TTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAG 268921
||||| || | | ||| ||||| ||||| ||||| | || || || |||| ||
Sbjct 394876 TTTTTCGCCGCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACCGAA 394935
Query 268922 GTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCAT 268981
|| || ||||| || || | |||| ||||| ||||| || || |||||||||||
Sbjct 394936 GTCCAAATTCCAGAGGCAAAGAGTTTCTACGGTTTCCAAATCATGATTGAAAATATTCAC 394995
Query 268982 TCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAA-G 269040
|| || | ||| | || || ||||| || || | || | ||||||| |
Sbjct 394996 TCTGAAACTTACTCCTTGTTGATCGATACCTACATCAAGGAC-----CCTAAAGAAAGTG 395050
Query 269041 ACTATTTTCTTCTATGAGA-----ACTAT----GGACTGTGTGAGaaaaaaaTCTGAATG 269091
| | | || ||| ||| | || || | | | ||||||| | |||||
Sbjct 395051 AAT-TCTTGTTCAATGCCATTCACACCATCCCAGAAATCGGTGAGAAGG----CCGAATG 395105
Query 269092 GGCTCTGAAATGGATAAACGATAGCG-CGCCTTAC--GGAGAAAGGTTAGTTGCTTTTGC 269148
|||| | | |||||| | || | |||||| || ||||| ||||||| |||||
Sbjct 395106 GGCTTTAAGATGGATTCAAGACGCTGACGCCTTGTTTGGTGAAAGACTAGTTGCCTTTGC 395165
Query 269149 CGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAG 269208
| | | |||||| | || || || || || |||||| | || || |||||||| || ||
Sbjct 395166 CTCCATTGAAGGTGTCTTTTTCTCCGGTTCCTTTGCCTCCATTTTCTGGTTGAAAAAGAG 395225
Query 269209 AGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACA 269268
||| | ||||| || ||||| || || ||||||||||| | || ||||||||||| ||
Sbjct 395226 AGGTATGATGCCCGGTTTAACCTTTTCCAACGAATTGATCTGTAGAGACGAAGGTTTGCA 395285
Query 269269 CTGCGACTTCGCTTGTTTATTATT 269292
| |||||| || || || || ||
Sbjct 395286 CACCGACTTTGCATGCTTGTTGTT 395309
>seq11
Length=662038
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || | || | |||||| || ||||| || || || || ||||||
Sbjct 621707 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 621766
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|||||||||||||||||||| | ||| || |||||||| || | || ||||| |||||
Sbjct 621767 GATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 621826
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || || ||||| | || ||||| || | ||| || || |||
Sbjct 621827 GGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCA 621886
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535
|| || | || || |||||||||||
Sbjct 621887 ACTTCCAAAGTGATGGTCTTACCAGT 621912
>seq9
Length=448031
Score = 132 bits (146), Expect = 1e-25
Identities = 162/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| | || | |||| || || || |||||||| ||||| || ||||||
Sbjct 69745 ATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCA 69686
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | |||||||||||||| | ||| || |||||||| || | || ||||| |||||
Sbjct 69685 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 69626
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || |||||||||| || ||||| || | || || || |||
Sbjct 69625 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 69566
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550
|| || | || || ||||||||||| | || || |||||
Sbjct 69565 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 69525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151392720367580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |