Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739075.1_202016-09- 21] 501 sequences; 12,400,786 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq12 156 4e-33 seq9 114 1e-20 seq11 105 7e-18 >seq12 Length=1053323 Score = 156 bits (172), Expect = 4e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || |||||| | ||| || || ||||||||||| ||||||||||| | | Sbjct 67149 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 67208 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || || || || || ||||||||||| | ||| ||||| || || Sbjct 67209 AAGGTTCTACCA-TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 67267 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| |||||||| || |||||| ||| | |||||||| ||||| || Sbjct 67268 GATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 67327 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || |||| |||||| |||||||||||||| Sbjct 67328 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 67375 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || |||||| | ||| || || ||||||||||| ||||||||||| | | Sbjct 67377 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 67436 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || ||| | ||| || ||||| || || ||||| ||||| | ||| ||||| || || Sbjct 67437 AA-GGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGG 67495 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || || || ||||| || || || | |||||||| ||||| || Sbjct 67496 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 67555 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| |||||||||||||| ||||| ||||| || || ||||| Sbjct 67556 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 67603 Score = 136 bits (150), Expect = 4e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545 || ||||| | || ||| || | |||||| || ||||||||||| |||||||||||| | Sbjct 499488 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 499429 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || | || || || ||||| ||||| | || || || || || Sbjct 499428 AAAGTTCTACCA-TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 499370 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||| || || ||||| ||| | ||||| || ||||| || Sbjct 499369 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 499310 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || ||||| || |||||||||||||| || |||||||||||||| ||| Sbjct 499309 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 499258 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| || | | ||| || |||| ||||| ||||| ||||||||||| || | | Sbjct 67605 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 67664 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | || | | | ||| || ||||| || || ||||| ||||| | || ||||| || || Sbjct 67665 AGCGTTCT-ACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 67723 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||||||||| || || ||| | || ||||| ||||| || Sbjct 67724 GATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 67783 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || |||||||||||||| ||||| || |||||||| ||||| Sbjct 67784 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 67831 Score = 118 bits (130), Expect = 1e-21 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 134501 CAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGT 134559 ||| || ||||| || ||||| ||||||||||| |||||||| | || || | | | | Sbjct 66935 CAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA-T 66993 Query 134560 CGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTT 134619 | || || || || || ||||||||||| | ||||| || || || || ||||| || | Sbjct 66994 CTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGT 67053 Query 134620 CTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGG 134679 |||||||||| || || ||| | ||||| || ||||| || || || || || | Sbjct 67054 CTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAG 67113 Query 134680 TTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| || | || || || ||||||||||| Sbjct 67114 TCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 67147 >seq9 Length=442649 Score = 114 bits (126), Expect = 1e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || ||| || | ||| | |||||||| ||||||||||||||||| | | Sbjct 71500 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 71441 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || ||| | ||| || | || || || ||||| ||||| | || || || || || Sbjct 71440 AA-GGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 71382 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || |||||||| ||| ||||| ||| | ||||| || ||||| || Sbjct 71381 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 71322 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705 || | ||| ||||| ||||| || ||||| || || ||| Sbjct 71321 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 71282 >seq11 Length=654230 Score = 105 bits (116), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || ||| || | |||| |||||||||||||| ||||||||||| Sbjct 623612 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 623671 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || | || || || ||||| ||||| | || || || || || Sbjct 623672 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 623731 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| || || ||||| ||| | ||||| || ||||| || Sbjct 623732 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 623791 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAA 134704 || | ||| ||||| ||||| || ||||| |||||||| Sbjct 623792 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 623829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505395234942520