Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739095.1_202016-09- 21] 482 sequences; 12,289,934 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq5 183 4e-41 >seq5 Length=561842 Score = 183 bits (202), Expect = 4e-41 Identities = 883/1390 (64%), Gaps = 42/1390 (3%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 || || |||| ||| ||| || || || ||||| | |||||| ||||||| |||||| Sbjct 301808 TACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGAT 301749 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATG-CGTTC 116021 || || ||||| ||||||||| | | || | | ||| | | | || | || Sbjct 301748 GCAGTAGGCATTGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATCTTTT 301689 Query 116022 CTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAG 116081 ||| ||| |||||| || | || | | | ||||||||||||||||| || Sbjct 301688 CTTAAGGT-GTCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAG 301630 Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141 |||||||| || || || ||||| | || || || ||||| || || || || | Sbjct 301629 TATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTCCTTCTGAGCTAG 301570 Query 116142 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 116201 ||| | || || | || || ||||| || || ||||| || | ||| | Sbjct 301569 TTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAGCAA 301510 Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTG 116261 ||| || || |||||||| | | ||| ||| || || || ||||||||||| Sbjct 301509 ACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTG 301450 Query 116262 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATA 116321 ||||| | ||||||| | |||||||||||| || |||| || || || || || Sbjct 301449 AACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTA 301390 Query 116322 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 116381 |||| | ||| || || || |||| ||| || ||||| || | |||||||| | Sbjct 301389 GTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAA 301330 Query 116382 CTTTTCGTAATCAAAACTGCGAGTCT---------------CTTCATTGACATACTTAGG 116426 |||| | | | | || ||||| |||| ||| || || || Sbjct 301329 TTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGCT--GG 301273 Query 116427 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 116486 | ||| | || |||| ||||| |||| || ||||| | | | ||| || | ||| Sbjct 301272 TAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAAT 301213 Query 116487 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 116546 ||| || || ||||| ||| ||| || ||||| |||||||| || ||| |||| Sbjct 301212 TTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTT 301153 Query 116547 ACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 116606 ||| ||||||||||| | | | || || || || || ||||| | | | ||| | Sbjct 301152 ACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGA 301093 Query 116607 CTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGT 116666 | ||||| | |||| | ||| || | || || || | |||||| || Sbjct 301092 ATACCATAATTTTTGGGCTTTGATAGT---CTTACCACGACCTTCTTTCTCGTAGCGGGT 301036 Query 116667 GTAGAGGGCCTCAAACTCTTCACC--CACAGCCTCTGAGAGCCCTGGTGCCTTAT-CTGG 116723 || || ||||||||||| ||||| ||| | || | | || || | || || ||| Sbjct 301035 ATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAA--CCAGGAG-CTGATGTTGG 300979 Query 116724 ACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 116783 | |||| | | ||| ||| || || || ||||||||||| || || || ||||| Sbjct 300978 AGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCA 300919 Query 116784 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 116843 || || | ||| | ||| | ||| ||| || | || || || | | || Sbjct 300918 TAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATC 300859 Query 116844 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CC 116897 | ||| || | ||||| || ||||| ||||||||||| | || | | || | Sbjct 300858 AATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCT 300799 Query 116898 CTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGG 116957 |||| |||| |||||| ||||| | || || || || || |||| ||| || Sbjct 300798 CTTG---TTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGG 300742 Query 116958 AATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACAT 117016 ||| | ||| | ||| || ||||| || ||| || || ||| | | | | Sbjct 300741 AATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTT-GAACGAATGT 300683 Query 117017 CGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGAC 117076 ||||| || | ||||||||| || || || || || || || ||| | | Sbjct 300682 TATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGG 300623 Query 117077 TGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTT 117136 || |||| ||||| ||||| ||||| |||| | || | | ||| || ||||||| Sbjct 300622 TGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTT 300563 Query 117137 GTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTT-GG 117195 | || |||| ||||| || ||||| | ||||| | |||| || || ||| || | Sbjct 300562 GAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGT-GAGTAAAATATTTTAGA 300504 Query 117196 GACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAG 117255 |||||| | || || || || ||| || |||| ||||| || || | || | Sbjct 300503 GACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTTTACCGTGGATGCCTAGTGCG 300444 Query 117256 ACCCGCATAA 117265 || | ||||| Sbjct 300443 ACTCTCATAA 300434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613503503619120