Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739095.1_202016-09- 21] 482 sequences; 12,289,934 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq12 163 3e-35 seq5 132 5e-26 seq9 125 8e-24 seq11 118 1e-21 >seq12 Length=1052652 Score = 163 bits (180), Expect = 3e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || ||||| || || || || |||||||| || || |||||||| || Sbjct 63985 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 63926 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | |||||||| |||||||| || ||||||||||||||| Sbjct 63925 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 63866 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | |||||||| ||||||||||| || |||| | | || || | ||||| ||| Sbjct 63865 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 63806 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | |||||||| ||||||||||| || |||||| Sbjct 63805 ATTCAAAAGGAGTCCACTCTTCACCTTGTCTTG 63773 Score = 136 bits (150), Expect = 5e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | ||||| ||||||||||| || || ||||| || | Sbjct 493720 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCT 493779 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||| | || || || |||||||| || ||||| || ||||| Sbjct 493780 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 493839 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||||||||||||| | || |||| | | || | | ||||| || Sbjct 493840 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 493899 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 ||||||||||||| ||||| || | |||||| Sbjct 493900 ATCCAAAAGGAATCTACTCTACACTTGGTCTTG 493932 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | ||||| || || || ||| | |||||||| || Sbjct 64213 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 64154 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | ||||| ||||||||||| || || |||||||| || Sbjct 64153 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 64094 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || ||||| |||||||| || || || | | | ||| | | ||||| || Sbjct 64093 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 64034 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 ||||||||||||| |||||||| Sbjct 64033 ATCCAAAAGGAATCTACTCTTCA 64011 >seq5 Length=561842 Score = 132 bits (146), Expect = 5e-26 Identities = 321/478 (67%), Gaps = 25/478 (5%) Strand=Plus/Minus Query 81223 TCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCG 81281 || ||| |||||||||| ||||| ||||| || || | ||||| || | ||| || Sbjct 300950 TCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCA-CG 300892 Query 81282 CGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCA 81341 ||||| | ||| ||||| | | || | ||| || | || || |||||||| Sbjct 300891 AATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCA 300832 Query 81342 TGGCTCCAGATACACGGCGATCGACCC------CTTGCGACGGCCACCCTGGTTGACGTA 81395 ||| ||||| || | ||| | || || |||| || ||||||||| || || Sbjct 300831 TGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTCTTGTTAC---CACCCTGGTCAACATA 300775 Query 81396 ACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGT 81455 ||||||||| || || ||||| | |||||| || | ||| | || |||||| || Sbjct 300774 ACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGT 300715 Query 81456 ACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGA 81515 ||| | || || || | | || | || ||| ||||| || ||||| | Sbjct 300714 ACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAG- 300656 Query 81516 CCACTTT--GAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCT 81573 || ||| |||||| |||||| |||| ||| || ||||| |||||||| || Sbjct 300655 -CAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCC 300597 Query 81574 TTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGA 81631 | |||||| ||| ||||||||| ||||| ||||| |||| ||| |||||||||| Sbjct 300596 TCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGG--TTTTGGAGTACCGGCATTGA 300539 Query 81632 ACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTT---GACATCAGGTCATAGGTTTC 81686 ||| ||||| | |||||| | ||||| ||| ||||||| || ||| ||||| Sbjct 300538 ACAACGTTGGAGAGGCGTGAGTAAAATA---TTTTAGAGACATCAAGTTATACGTTTC 300484 >seq9 Length=436543 Score = 125 bits (138), Expect = 8e-24 Identities = 338/512 (66%), Gaps = 15/512 (3%) Strand=Plus/Plus Query 81232 TTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTC 81290 ||||||||| ||||||||||| || || | ||||| || | ||| || || || Sbjct 240642 TTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCTCTTGCA-CGAATTTCTTC 240700 Query 81291 ATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAG 81350 | ||| || | | | |||| |||||| | ||| || |||||||||||||||| Sbjct 240701 CTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGATATCTGCATGCCATGGCTCCAA 240760 Query 81351 ATACACGGCGATCGACCC------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGT 81404 | | ||||| | || |||| || ||||||||| || ||||||||||| Sbjct 240761 GAAAAGGGCGAAAGCACCAGGTCTCTTGTTAC---CACCCTGGTCCACATAACGGGCAGT 240817 Query 81405 CGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGAT 81464 || || ||||| | |||||| || | || | ||| |||||| ||||| |||| Sbjct 240818 ATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGTACCAGCGAT 240877 Query 81465 ACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTT-- 81522 | || || ||| || | ||| |||| |||||| | ||||||| || ||| Sbjct 240878 ATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCACCTG--CAGTTTTG 240935 Query 81523 GAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATG 81582 |||||| |||||| |||| || |||||||| || ||||| || | |||||| Sbjct 240936 GAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGTCATCCTTCATG 240995 Query 81583 TCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGG 81642 ||| |||||||| ||||| ||||| | | || || ||||| | |||||| Sbjct 240996 GCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTGAATAAAGTTGGG 241055 Query 81643 GTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATA 81702 | |||||| |||| || | ||||||| | ||| || | | || | ||| Sbjct 241056 GAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGCACAGATTCGATA 241115 Query 81703 TCGTCACCGTGAATACCGATAGCTACACGCAT 81734 ||| ||| || ||||| | || |||||||| Sbjct 241116 TCGCTACCATGGATACCTAGCGCCACACGCAT 241147 Score = 111 bits (122), Expect = 2e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 ||||||||||| | || || ||||| || ||| | || ||||| || ||| | ||| Sbjct 75043 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 75102 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || ||||| |||||||| || || || || ||||| || | | Sbjct 75103 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 75162 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || ||||||||||||||| | || || | | | ||| | | ||||| || | ||||| Sbjct 75163 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 75222 Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618 ||||||||| | || |||||||| Sbjct 75223 GAATCCACTTTGCACTTAGTCTTG 75246 >seq11 Length=651492 Score = 118 bits (130), Expect = 1e-21 Identities = 160/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 27396 TATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGT 27455 |||| | || || | | ||| || ||||| | || || ||||| || ||| | || || Sbjct 623684 TATTCCAATTTTGTACAGCTTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGT 623625 Query 27456 TGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCC 27515 ||| || ||| | ||||| ||| | ||| | || || || |||||||| || || || Sbjct 623624 TGAATCTTCTGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCC 623565 Query 27516 TCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGC 27575 || ||||| || | | || ||||||||||||||| | || || | | | || ||| | Sbjct 623564 ACCTGACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATC 623505 Query 27576 AGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 ||||| || ||||||||||||||||| | ||| | |||||| Sbjct 623504 TGACTACAACATCCAAAAGGAATCCACTTTACATTTGGTCTTG 623462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570306963879840