Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739215.1_202016-09- 21] 490 sequences; 12,293,008 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq12 116 9e-21 seq11 105 2e-17 >seq12 Length=1064327 Score = 116 bits (128), Expect = 9e-21 Identities = 153/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || |||||||| || |||||||||||||| |||| |||||||| |||||||| | Sbjct 496114 CAAG-TGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCA 496056 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| | || || ||||| | | || |||||||| ||||| | Sbjct 496055 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGA 495996 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | |||| ||| || ||||| || |||||||| || | Sbjct 495995 TCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTAC 495936 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || | |||||| ||||| | ||||| || Sbjct 495935 CGGTTAAAGTCTTGACGAAAATTTGCATCTT 495905 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| || |||||||||||||| || | || ||||| || ||||||| Sbjct 64852 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTA 64910 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||| ||||| | |||||| || || | | ||| |||||||| || || | Sbjct 64911 GCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGA 64970 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| || || | || | |||| || || || || | ||| || ||||| | Sbjct 64971 TTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTAC 65030 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | |||||| || |||| |||||| Sbjct 65031 CGGTCAAAGTCTTAACAAAGATCTGCAT 65058 Score = 105 bits (116), Expect = 2e-17 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || || || || |||||||| | || ||||| || || ||||||||||| | | ||| Sbjct 65066 CTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTT 65125 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || || |||||||| || ||||| ||||| | || || || || | | ||| ||| Sbjct 65126 CTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCT 65185 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| ||||||||||| || || | || | | | || ||| || ||||| | Sbjct 65186 TCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAAT 65245 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || | |||||| ||||| | |||||| Sbjct 65246 GTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 65286 Score = 93.3 bits (102), Expect = 1e-13 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 |||||| |||||||| ||||| ||||| || ||||| || | | ||||| |||||||| Sbjct 64365 GACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 64424 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 ||| || ||||| || || | || |||||||| | | || |||||||| ||||| Sbjct 64425 TAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 64484 Query 152015 AATTTT 152020 |||||| Sbjct 64485 AATTTT 64490 Score = 89.7 bits (98), Expect = 1e-12 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 ||||||||||| || ||||| ||||| | | ||||| || ||||| || || ||| Sbjct 64634 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 64693 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || || || | || || || || | | || |||||||| ||||||||||| |||| Sbjct 64694 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTG 64753 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 || | || | |||| ||| || || || || || ||||| || || || ||||| Sbjct 64754 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 64813 Query 152088 TTCACGAAGACCTGCAT 152104 || ||||| | ||||| Sbjct 64814 TTGACGAAAATTTGCAT 64830 >seq11 Length=668904 Score = 105 bits (116), Expect = 2e-17 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||| | ||| | ||| || ||||||||||||||||| || | || |||||| || Sbjct 620605 TCTCAAGACCAAATGTAAAGTGGATTCTTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 620664 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||||| | || || || ||||| | || || ||||| | | ||| |||||||| Sbjct 620665 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 620724 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| || || |||||| | || | | |||| ||| || ||||| | ||| || Sbjct 620725 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 620784 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 || || || || | |||||| |||||| Sbjct 620785 GGTCTTACCAGTCAAAGTCTTAACGAAG 620812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153813556168790