Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739235.1_202016-09- 21] 533 sequences; 12,479,185 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq12 118 9e-22 seq9 84.2 2e-11 >seq12 Length=1059319 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || ||||| ||||| ||||| |||||||| ||||| |||||||| ||| | Sbjct 500568 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 500509 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | |||| || |||||||||||| || || ||| | || | || ||||| || || Sbjct 500508 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 500449 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||| ||||| || || || || | | ||| || || || ||| | Sbjct 500448 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 500389 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211 |||| |||||| || || ||||| || || ||||| ||||||||||| || Sbjct 500388 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 500339 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || |||||||||||||| | ||||| ||||| || ||||| ||||| | Sbjct 67322 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 67381 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| || ||||||| ||| || || ||| | || | || |||||||| || Sbjct 67382 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 67441 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||| ||||| ||||||| || || | | ||| || || || ||| Sbjct 67442 ATACCTTCCTTGTCTTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACC 67501 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | ||| || || || || |||| || ||||||||||||||||| Sbjct 67502 TCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 67548 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || ||| | ||| | ||||| || || || || || ||||||||||| | Sbjct 67778 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 67837 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| || ||||| | || || || ||| | || | || |||||||| || Sbjct 67838 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 67897 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||| ||||| |||||| || || | | | | | |||| || ||| | Sbjct 67898 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 67957 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| || |||||||| |||||||| || ||||| ||||| ||||| Sbjct 67958 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 68004 >seq9 Length=440459 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || ||||| || || || | || ||||||||||| |||||||| || | Sbjct 70952 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 70893 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| || ||||||||||| || || ||| | || | || ||||| || || Sbjct 70892 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 70833 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||| ||||| ||| ||| || || | | ||| || || || ||| | Sbjct 70832 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 70773 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAA 20200 |||| || ||||| || || ||||| || ||||||||| Sbjct 70772 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 70734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419584474387773