Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739235.1_202016-09- 21] 533 sequences; 12,479,185 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq12 185 2e-41 seq9 129 1e-24 seq11 114 2e-20 >seq12 Length=1059319 Score = 185 bits (204), Expect = 2e-41 Identities = 183/237 (77%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||||||||||| | |||| |||||| |||| |||||| ||| || Sbjct 67312 AATTTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTT 67371 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | ||||||| || || | ||| || |||||||| || ||||| ||||| Sbjct 67372 ATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTG 67431 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || ||||| || ||||| ||||| | || | || |||||| || || Sbjct 67432 ATCTGGAGGAATACCTTCCTTGTCTTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGA 67491 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| ||||| ||||| |||||||| |||||||| || || || ||||| |||||||| Sbjct 67492 AGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 67548 Score = 156 bits (172), Expect = 8e-33 Identities = 128/156 (82%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| |||| ||| || || |||||||| |||||||||||||| ||||| || |||||||| Sbjct 67165 ATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTT 67224 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 |||||| ||||| |||| | || |||||| |||||||| ||||| ||||| ||||| Sbjct 67225 ATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 67284 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| || |||||||| ||||| || || |||||||| Sbjct 67285 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 67320 Score = 147 bits (162), Expect = 4e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||||||||||| | |||| || | |||| || || || || |||||||| Sbjct 500569 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 500510 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 || |||||| ||| || ||||| || || ||||| || ||||| ||||| ||||| || Sbjct 500509 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 500450 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || ||||| || ||||| || |||| || | ||| |||||| || ||||| ||||| Sbjct 500449 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 500390 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||| || || ||||| ||||| |||| || || || || |||||||| || Sbjct 500389 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 500339 Score = 138 bits (152), Expect = 2e-27 Identities = 178/245 (73%), Gaps = 2/245 (1%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | | || || ||||| || || | ||| || ||| || || || Sbjct 67775 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 67834 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | ||||||| || |||| || || |||||||| || ||||| |||||||| ||| Sbjct 67835 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 67894 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| ||||| | || | || || ||||||||||| ||| Sbjct 67895 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 67954 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT--TTTATTAG 193368 ||||| | ||||| |||||||| || | || || || || || ||||| | |||||| Sbjct 67955 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATTAG 68014 Query 193369 TAAAA 193373 | ||| Sbjct 68015 TTAAA 68019 Score = 125 bits (138), Expect = 1e-23 Identities = 170/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||||||||||| | |||| || | |||| || || || || Sbjct 67540 AATTTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTT 67599 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || || |||||| || |||| || || |||||||| || || |||||||| Sbjct 67600 GTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTG 67659 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || ||||| || || || ||||| | || | || || || ||||| Sbjct 67660 ATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGA 67719 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||| |||| ||| || |||||||| || | || || ||||| || ||||| Sbjct 67720 GGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 67776 >seq9 Length=440459 Score = 129 bits (142), Expect = 1e-24 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||||||||| | || | ||||| || | ||||| ||| || ||||| Sbjct 70955 ATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCA 70896 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || |||||| || || ||||| || || ||||| || ||||| ||||| ||||| Sbjct 70895 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 70836 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || || | || | ||| |||||| || ||||| ||| Sbjct 70835 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 70776 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAA 193351 ||||| | ||| || || ||||| || | || || ||||| Sbjct 70775 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 70735 >seq11 Length=658116 Score = 114 bits (126), Expect = 2e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| |||| | |||| ||| || || | || || || || ||||| Sbjct 627161 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 627220 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 |||| |||||| || || ||||| || || ||||| || ||||| ||||| ||||| Sbjct 627221 GATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 627280 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || |||| || | ||| ||| || || ||||| ||| Sbjct 627281 GGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCA 627340 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGT 193336 ||||| | ||| || || ||||| || Sbjct 627341 ACTTCCAAAGTGATGGTCTTACCAGT 627366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899648406052560