Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739235.1_202016-09- 21] 533 sequences; 12,479,185 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq12 122 2e-22 seq9 120 7e-22 seq11 98.7 2e-15 >seq12 Length=1059319 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || || || ||||||| ||| ||||||||| | || || ||| Sbjct 500366 ACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCC 500425 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || ||||| ||| || ||| |||||| | ||||| || || ||| Sbjct 500426 AAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 500485 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||||||||| || |||||| |||| |||||| |||| || || |||||||| ||| Sbjct 500486 CAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATCCAAAAGGAATCTACTCTACAC 500545 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 500546 TTGGTCTTGAGA 500557 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || || ||||| || || || || | || || ||| ||||||||| | Sbjct 67540 TTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTGACACTAT 67481 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || || ||| ||| |||||||| || ||||| ||| || || |||||| | Sbjct 67480 TGACAACGTTAAGTCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATT 67421 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 ||||| ||||| ||||| ||||||| || || || || | ||||| ||| | ||||| Sbjct 67420 GATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATTCAGAA 67361 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||||||||| | || | || |||||| Sbjct 67360 AGAGTCTACGTTGCATTTGGTGTTGAGA 67333 Score = 91.5 bits (100), Expect = 3e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 206215 GAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGA 206274 || || ||| ||||||||| | || || ||| ||| |||||||| || ||||| Sbjct 67155 GAGGTTGAATCTTCTGACACTATTGACAACGTTAAGTCAAAAATTCAAGACAAGGAAGGT 67096 Query 206275 ATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACT 206334 ||| || ||| |||||| | ||||| ||||| || || | |||||||| || || Sbjct 67095 ATTCCTCCAGACCAGCAAAGATTGATCTTTGCCGGTAAACAACTAGAAGATGGTAGAACG 67036 Query 206335 TTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAG 206384 || | || ||||| | || || ||||| ||||||||||| || ||||| Sbjct 67035 CTGTCGGACTACAATATTCAAAAGGAGTCCACTCTTCACCTCGTCTTGAG 66986 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || | || || ||||| |||||||| || || ||| || ||| Sbjct 67773 CAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCCGAC 67714 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| || || || || || ||||| || || || || Sbjct 67713 ACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAACAG 67654 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||| ||||| |||||| | ||||| || || || ||| | || |||||| || Sbjct 67653 AGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAACATC 67594 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || || || |||||||||||| | || |||||| Sbjct 67593 CAAAAGGAATCTACTCTTCACTTGGTGTTGAGA 67561 Score = 86.0 bits (94), Expect = 1e-11 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816 |||||| || | |||||||||||| || || |||| || ||||||| ||| || || || Sbjct 67561 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 67620 Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 ||||| |||||||| ||||| ||||| | || |||||| Sbjct 67621 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGA 67660 >seq9 Length=440459 Score = 120 bits (132), Expect = 7e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || | || || || || |||||||||||||| ||| ||||||||| | Sbjct 70734 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 70793 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || || ||| |||||||||||| || ||||| || || ||| |||||| | Sbjct 70794 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 70853 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 ||||| || || ||||| |||||||| || || || ||| | || |||||| | || || Sbjct 70854 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 70913 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||| || ||| | ||| | || |||||| Sbjct 70914 AGAATCCACTTTGCACTTAGTCTTGAGA 70941 >seq11 Length=658116 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||||||||||| ||| ||||||||| | || || ||| Sbjct 627366 ACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACAATGTCAAGTCC 627307 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || ||||| || || ||| |||||| | ||||| || || ||| Sbjct 627306 AAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 627247 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || |||||||| || || ||| | | || |||||| |||| || || || ||| | || Sbjct 627246 CAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAGGAATCCACTTTACAT 627187 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 627186 TTGGTCTTGAGA 627175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181812729271893