Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739235.1_202016-09- 21] 533 sequences; 12,479,185 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq9 102 9e-17 >seq9 Length=440459 Score = 102 bits (112), Expect = 9e-17 Identities = 284/433 (66%), Gaps = 2/433 (0%) Strand=Plus/Minus Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329 ||||| || ||||| | ||||| | ||||||||||||||| || ||||| ||||| Sbjct 239291 TACTTCACTCACGCTTCCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCT 239232 Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 || ||| | || || |||||||||||||| ||||| || || || || || | || Sbjct 239231 TCATGTTTCTTAGTTGCCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAA 239172 Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAACGTCCGT 53449 || ||||| || ||||| | |||||| | ||| | || | ||| ||||| Sbjct 239171 GAATGTGCTATGATTTCCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGT 239112 Query 53450 GCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTC 53509 | | || | ||| || || ||||| | | || | | |||||| | Sbjct 239111 TCCACAGGTTCTTATATCGCTGGTACCAACGGTACTTCAAACGGGTTGATTCCTATGATT 239052 Query 53510 CGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCG 53569 || || ||||| || || ||||| || || ||||||||||| ||| | || | Sbjct 239051 CGTGTTTTCAATAATACTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCTGGTGCT 238992 Query 53570 TTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTG 53629 |||||| | | | | ||||| ||||| || || || | || ||| |||| | | Sbjct 238991 TTCGCCCTTTTCTTGGAGCCATGGCATGCAGATATCTTCGACTTTGTCGATATCAGAAAA 238932 Query 53630 AATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTACAGCTCTGTGGATTCCGGA 53688 | || ||| | ||||| || || ||| | || |||| | ||||| ||||| || || Sbjct 238931 ACACATGGTAAGGAAGAAATTCG-TGCAAGAGATTTGTTCCCTGCTCTATGGATCCCTGA 238873 Query 53689 CCTCTTCATGCAA 53701 || |||||| || Sbjct 238872 TCTTTTCATGAAA 238860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547212354173400