Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739235.1_202016-09- 21] 533 sequences; 12,479,185 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq11 176 9e-39 seq12 163 6e-35 seq9 159 7e-34 >seq11 Length=658116 Score = 176 bits (194), Expect = 9e-39 Identities = 159/200 (80%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| |||||| ||| ||| ||||||||||||||||||| || || | || || || Sbjct 627182 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCC 627241 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || ||||||||||| | |||||||||| || ||||| |||||||||||| Sbjct 627242 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGG 627301 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | || || | || || ||||| |||| ||| ||||| | |||||| |||||| Sbjct 627302 ATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTA 627361 Query 283071 CCCGTCAAAGTCTTAACGAA 283090 || ||||||||||||||||| Sbjct 627362 CCAGTCAAAGTCTTAACGAA 627381 >seq12 Length=1059319 Score = 163 bits (180), Expect = 6e-35 Identities = 153/195 (78%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||| | | || | ||||| || | ||| || || ||||| Sbjct 500533 TTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 500474 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | |||||||||| |||||||| ||||||||||||||||| | || || | Sbjct 500473 GATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 500414 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| |||| ||| ||||| || || || |||||||| || |||||||| || Sbjct 500413 GTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGAC 500354 Query 283088 GAATATCTGCATTTT 283102 ||| || ||||| || Sbjct 500353 GAAAATTTGCATCTT 500339 Score = 156 bits (172), Expect = 9e-33 Identities = 152/193 (79%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966 ||| ||||||||||||||||||| |||| || | || || ||||| || || ||||||| Sbjct 67585 TTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCTAGCTGCTTACCGGCAA 67643 Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 ||||||| | ||||| || || ||||| |||||||| ||||| || | || ||| Sbjct 67644 AGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGT 67703 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 ||||||| ||||| || | ||| || || | |||||| || ||||| ||||||||||||| Sbjct 67704 TATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAA 67763 Query 283087 CGAATATCTGCAT 283099 | || |||||||| Sbjct 67764 CAAAGATCTGCAT 67776 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || | || || |||||||| ||| || || || |||||||| |||| Sbjct 67777 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 67836 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| | || || ||||| || || |||||||||||||| | |||||| || || Sbjct 67837 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 67896 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| ||||||||||| || || | || ||| | ||||| || || |||| ||| || Sbjct 67897 GATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 67956 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | || || || ||||| ||||||||||| ||||| |||||||| Sbjct 67957 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 68004 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||| ||||| ||||| || ||||| || |||| ||||| | || || || Sbjct 67340 ACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCC 67399 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 ||||| || |||||||||||||| | |||||| || |||||||| ||||||||||| Sbjct 67400 AGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGA 67459 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 || |||| || ||| | || |||||||| |||| ||| || || || || || |||||| Sbjct 67460 ATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTA 67519 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||| ||||| || || || ||||| Sbjct 67520 CCTGTCAGTGTCTTGACAAAAATTTGCAT 67548 Score = 125 bits (138), Expect = 1e-23 Identities = 119/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| || |||||||| | ||||| | ||||| ||||||||||| ||||||||| Sbjct 67010 TCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGTTTACCGGCAAAG 67069 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | ||| ||||| |||||||| ||||||||||| || |||| || ||| | Sbjct 67070 ATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTTGACTTAACGTTG 67129 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGT 283060 || |||||||| |||| ||| || || || || Sbjct 67130 TCAATAGTGTCAGAAGATTCAACCTCTAGGGT 67161 >seq9 Length=440459 Score = 159 bits (176), Expect = 7e-34 Identities = 154/195 (79%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTG 282955 || || ||| ||||||||| ||||||||||||| |||| || | || || || | ||| Sbjct 70928 TGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATTG 70870 Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015 || || ||||||||||| | |||||||||| || ||||| ||||||||||| ||||| Sbjct 70869 CTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTT 70810 Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 || || || | || |||||||| |||| ||| ||||| | |||||| |||||||| || Sbjct 70809 TGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGT 70750 Query 283076 CAAAGTCTTAACGAA 283090 ||||||||| || || Sbjct 70749 CAAAGTCTTGACAAA 70735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046732051752582