Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739305.1_202016-09-
21] 228 sequences; 12,144,452 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq12 132 3e-26
seq9 125 5e-24
>seq12
Length=1051174
Score = 132 bits (146), Expect = 3e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || || ||||| | || || ||||| || ||||| |||||
Sbjct 63172 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 63231
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| ||||||| | ||| || || || | ||||| | |||||| || |||
Sbjct 63232 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 63291
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| |||||| || || || | || || || ||| | ||| ||
Sbjct 63292 ATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 63351
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|||| ||| || || || ||||| |||||||| || ||||||||||||
Sbjct 63352 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 63399
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || || || || || || || || ||||| |||||||| |||
Sbjct 492104 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 492045
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| | |||| | ||||| ||||| || ||||| | ||||| | ||||||||| ||||
Sbjct 492044 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 491985
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| || ||| ||| ||| | || || || || | ||| ||
Sbjct 491984 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 491925
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366
|| | |||||| || ||||| || | ||| || || ||||||||||| ||
Sbjct 491924 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 491875
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || || || ||||| || || || ||||| |||||||| ||
Sbjct 62944 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 63003
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| |||| | ||||||| ||| || ||||| | ||||| | ||||| || ||
Sbjct 63004 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 63063
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| |||||||| || ||| || || || || | || || || ||| | ||| ||
Sbjct 63064 ATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 63123
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|||| ||| || || || ||||| |||||||| || ||||||||||||
Sbjct 63124 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 63171
Score = 118 bits (130), Expect = 8e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
||||| ||||| || || || | ||||| ||||| || ||||| || ||||| ||
Sbjct 62716 CCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGAC 62775
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| | ||||||| ||| || || || | ||||| | ||| ||||| |||
Sbjct 62776 AGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGA 62835
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| |||||| ||| || | || || || || | ||| ||
Sbjct 62836 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACC 62895
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|||| ||| || || ||||||||||| || || |||||||||||||||
Sbjct 62896 TCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 62943
Score = 118 bits (130), Expect = 8e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| | |||| || | ||| | |||||| || || || |||||||||||
Sbjct 63446 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 63505
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| ||||||||| || || || || | ||||| | |||||| || ||
Sbjct 63506 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 63565
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| |||||| ||| || | || ||||||||| | ||| ||
Sbjct 63566 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 63625
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| || || ||||||||||| |||| ||| || || ||||| ||||||
Sbjct 63626 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATA 63673
>seq9
Length=445335
Score = 125 bits (138), Expect = 5e-24
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || ||||| || | ||||| |||||||| |||||||| ||
Sbjct 78574 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 78515
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| |||| ||||||| ||||| || ||||| | ||||| | ||||||||| |||
Sbjct 78514 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 78455
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| ||| || ||| ||| | || || || || | ||| ||
Sbjct 78454 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 78395
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15355
|| || || ||||| ||||| |||| ||| || ||||||
Sbjct 78394 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 78356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362178193594548
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |