Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739355.1_202016-09-
21] 537 sequences; 12,259,592 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq12 167 5e-36
seq10 149 1e-30
seq11 141 2e-28
seq9 132 1e-25
seq242 125 2e-23
>seq12
Length=1044005
Score = 167 bits (184), Expect = 5e-36
Identities = 155/197 (79%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| || || || || |||||||| | |||||||| ||||||||||| || |||
Sbjct 71503 GTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCA 71562
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | ||||||||||| ||||| || ||||||||||| |||||||| |||
Sbjct 71563 GCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATCTTACTTTTG 71622
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || ||| || ||| |||||||| || |||||||| || || || |||
Sbjct 71623 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 71682
Query 104543 TTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 71683 TTGACGAAAATTTGCAT 71699
Score = 167 bits (184), Expect = 5e-36
Identities = 177/231 (77%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| | || | || | ||| || ||||| ||||||||||| ||||| |||
Sbjct 71698 ATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCA 71757
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || |||||||||||||| ||||| || || |||||||| | || |||||||| |||
Sbjct 71758 GACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGA 71817
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTT-ACATTTTCTACGGTATCGCTAGGTTC 104508
|| || ||||| || || ||||| ||| ||||| || || || | || ||| || |||
Sbjct 71818 GGAATACCTTCCTTGTCTTGAAT-TTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTC 71876
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||||||| || |||||||| || || || ||||| || || || |||||
Sbjct 71877 AACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 71927
Score = 140 bits (154), Expect = 7e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || || |||||||| ||||| || || |||||||| ||||||||||| || ||
Sbjct 71275 GTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCG 71334
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | || || || || ||||| || ||||| || || ||||| || | ||
Sbjct 71335 GCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 71394
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || || || ||| |||||||| || ||||||||||| || |||||
Sbjct 71395 ACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTC 71454
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| || |||||
Sbjct 71455 TTGACAAAAATTTGCAT 71471
Score = 140 bits (154), Expect = 7e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| |||||||| || || ||||| || ||||||||||||||||| || || ||
Sbjct 72187 GTAGATTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCG 72246
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | || |||||||| ||||| || ||||| || || ||||| || | ||
Sbjct 72247 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTA 72306
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||||||| || ||| || || | ||| || || ||||| || | ||
Sbjct 72307 ACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTC 72366
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 72367 TTGACGAAAATCTGCAT 72383
Score = 134 bits (148), Expect = 3e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| || || || || |||||||| | ||||||||||||||||| || || ||
Sbjct 71959 GTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCG 72018
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | |||||||||||| ||||| || ||||| || ||||| || || | ||
Sbjct 72019 GCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTA 72078
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || ||| | ||| ||||||| || || || ||||| || | ||
Sbjct 72079 ACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTC 72138
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 72139 TTAACAAAGATCTGCAT 72155
Score = 125 bits (138), Expect = 2e-23
Identities = 152/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|||| |||||||| || || || || ||||| || | ||||||||| ||||| | |||
Sbjct 474882 TGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGC 474823
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| |||||||| || | || ||||| ||||| || || ||||| || || || |||||
Sbjct 474822 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTG 474763
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| || ||||| || | || || || ||| || || || |||||||||||||| ||
Sbjct 474762 GACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTT 474703
Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563
| || || || || || ||||| |||
Sbjct 474702 AAAGTCTTGACGAAAATTTGCATCTTG 474676
>seq10
Length=744155
Score = 149 bits (164), Expect = 1e-30
Identities = 376/564 (67%), Gaps = 26/564 (5%)
Strand=Plus/Plus
Query 268745 TACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTA 268804
||||| | |||| |||||||| ||||| | |||||| | ||| ||||| | || |
Sbjct 387479 TACAAGCGTGCCGAAGCTTCTTTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATC 387538
Query 268805 ATAGATTGGAAAAATTTAA--AACCAGAA-GAAAGAAGATTTATATCTTATATTCTTGCG 268861
|| ||||| || || ||| |||| || ||| || || || |||||||
Sbjct 387539 CATGACTGGAACAACAGAATGAACGAGAACGAGAGATTTTTCATTTCCAGAGTTCTTGCC 387598
Query 268862 TTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAG 268921
||||| || | | ||| ||||| ||||| ||||| | || || || |||| ||
Sbjct 387599 TTTTTCGCCGCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACCGAA 387658
Query 268922 GTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCAT 268981
|| || ||||| || || | |||| ||||| ||||| || || |||||||||||
Sbjct 387659 GTCCAAATTCCAGAGGCAAAGAGTTTCTACGGTTTCCAAATCATGATTGAAAATATTCAC 387718
Query 268982 TCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAA-G 269040
|| || | ||| | || || ||||| || || | || | ||||||| |
Sbjct 387719 TCTGAAACTTACTCCTTGTTGATCGATACCTACATCAAGGAC-----CCTAAAGAAAGTG 387773
Query 269041 ACTATTTTCTTCTATGAGA-----ACTAT----GGACTGTGTGAGaaaaaaaTCTGAATG 269091
| | | || ||| ||| | || || | | | ||||||| | |||||
Sbjct 387774 AAT-TCTTGTTCAATGCCATTCACACCATCCCAGAAATCGGTGAGAAGG----CCGAATG 387828
Query 269092 GGCTCTGAAATGGATAAACGATAGCG-CGCCTTAC--GGAGAAAGGTTAGTTGCTTTTGC 269148
|||| | | |||||| | || | |||||| || ||||| ||||||| |||||
Sbjct 387829 GGCTTTAAGATGGATTCAAGACGCTGACGCCTTGTTTGGTGAAAGACTAGTTGCCTTTGC 387888
Query 269149 CGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAG 269208
| | | |||||| | || || || || || |||||| | || || |||||||| || ||
Sbjct 387889 CTCCATTGAAGGTGTCTTTTTCTCCGGTTCCTTTGCCTCCATTTTCTGGTTGAAAAAGAG 387948
Query 269209 AGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACA 269268
||| | ||||| || ||||| || || ||||||||||| | || ||||||||||| ||
Sbjct 387949 AGGTATGATGCCCGGTTTAACCTTTTCCAACGAATTGATCTGTAGAGACGAAGGTTTGCA 388008
Query 269269 CTGCGACTTCGCTTGTTTATTATT 269292
| |||||| || || || || ||
Sbjct 388009 CACCGACTTTGCATGCTTGTTGTT 388032
>seq11
Length=651726
Score = 141 bits (156), Expect = 2e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || | || | |||||| || |||||||| || || || ||||||
Sbjct 624365 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCTTTTTGGATGTTGTAGTCA 624424
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|||||||||||||||||||| | ||| || |||||||| || | || ||||| |||||
Sbjct 624425 GATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 624484
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || || ||||| | || ||||| || | ||| || || |||
Sbjct 624485 GGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCA 624544
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535
|| || | || || |||||||||||
Sbjct 624545 ACTTCCAAAGTGATGGTCTTACCAGT 624570
>seq9
Length=437923
Score = 132 bits (146), Expect = 1e-25
Identities = 162/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| | || | |||| || || || |||||||| ||||| || ||||||
Sbjct 77457 ATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCA 77398
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | |||||||||||||| | ||| || |||||||| || | || ||||| |||||
Sbjct 77397 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 77338
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || |||||||||| || ||||| || | || || || |||
Sbjct 77337 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 77278
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550
|| || | || || ||||||||||| | || || |||||
Sbjct 77277 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 77237
>seq242
Length=468
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| || || || || |||||||| | |||||||||||||||| || || ||
Sbjct 274 GTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAACTGCTTACCG 215
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | ||| |||||||| ||||| || ||||| || ||||| || || | ||
Sbjct 214 GCAAAGATCAACCTTTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTA 155
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || ||| | ||| ||||||| || || || ||||| || | ||
Sbjct 154 ACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTC 95
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 94 TTAACAAAGATCTGCAT 78
Score = 109 bits (120), Expect = 1e-18
Identities = 122/163 (75%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 104397 TTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTC 104456
||||||| |||||||||||||| || |||||||| | || || || || ||||| || |
Sbjct 468 TTCTACCATCTTCTAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATAC 409
Query 104457 CTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTA 104516
|||| || || ||||| || | || || || || | || || || ||| |||||||
Sbjct 408 CTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTA 349
Query 104517 GTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
| || |||||||| || || || ||||| || || || |||||
Sbjct 348 GGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151390478019196
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