Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739355.1_202016-09-
21] 537 sequences; 12,259,592 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq12 183 6e-41
seq11 170 4e-37
seq9 161 2e-34
seq242 154 3e-32
>seq12
Length=1044005
Score = 183 bits (202), Expect = 6e-41
Identities = 175/223 (78%), Gaps = 1/223 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || || || || || || ||||| ||||| || || || || || ||
Sbjct 72171 CAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTC 72230
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||||| |||||| ||||| || || | ||||||||| || || || || |||||||||||
Sbjct 72231 TTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTC 72290
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|||||| || | ||| ||| |||||||| || | ||||| |||||||| || |||||
Sbjct 72291 TTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGT 72350
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCTATTA 68471
||| || || | ||||||||||| |||||||| || ||||||
Sbjct 72351 TTTACCGGTCAAAGTCTTGACGAAAATCTGCATAAT-CTATTA 72392
Score = 178 bits (196), Expect = 2e-39
Identities = 167/213 (78%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||||||||| || || || ||||||||||| || ||||| | || || |||||
Sbjct 474892 CAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATC 474833
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| |||||||| |||||||||||
Sbjct 474832 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 474773
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | |||||| || || ||||| | ||||| ||||||| ||| || ||
Sbjct 474772 TTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGT 474713
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||||||||| || |||||
Sbjct 474712 CTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 474680
Score = 150 bits (166), Expect = 3e-31
Identities = 161/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || | ||| || |||||||| ||||| || || || || || || || || |||||
Sbjct 71259 CAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATC 71318
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||||| ||||| ||||| || || | |||||| ||||| || ||||| |||||||||||
Sbjct 71319 TTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC 71378
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|||||| || | ||| ||| || || ||||| | ||||| || || | ||| || ||
Sbjct 71379 TTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGT 71438
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || |||||||| || || |||||
Sbjct 71439 CTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 71471
Score = 150 bits (166), Expect = 3e-31
Identities = 161/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||| || | ||| |||||||| || ||||||||||| || || || || || ||
Sbjct 71715 CAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTC 71774
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| | ||||| ||||| || || | ||||||||| || || ||||| |||||||||||
Sbjct 71775 TTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC 71834
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|||||| || |||||| || || ||||| | ||||| || || | ||| || ||
Sbjct 71835 TTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 71894
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || || |||||||| || |||||
Sbjct 71895 CTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 71927
Score = 145 bits (160), Expect = 1e-29
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || || || || ||||||||||| || || || | || || || ||
Sbjct 71943 CAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTC 72002
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||||| |||||| ||||| || || | || ||||| || || || || |||||||||||
Sbjct 72003 TTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTC 72062
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|| || || | ||| ||| ||||| ||||| | ||||| || || || ||||||||
Sbjct 72063 CTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGT 72122
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || || | ||||| || || ||||||||
Sbjct 72123 TTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 72155
Score = 132 bits (146), Expect = 9e-26
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || || || || ||||||||||| || || || | || || |||||
Sbjct 71487 CAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATC 71546
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||||| ||||| || || || || | ||| ||||| || || || || ||||| || ||
Sbjct 71547 TTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATC 71606
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||| |||||| || || ||||| | ||||| || || | ||| || ||
Sbjct 71607 TTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 71666
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || || |||||||| || |||||
Sbjct 71667 CTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 71699
>seq11
Length=651726
Score = 170 bits (188), Expect = 4e-37
Identities = 160/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||| |||| ||||| |||||||||||||| || || || || || || || ||
Sbjct 624382 CAAGACCAAATGTAAAGTGGATTCTTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTC 624441
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| ||||| || |||||||||||
Sbjct 624442 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTC 624501
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | |||||| || |||||||| | ||||| |||||||| ||||||||
Sbjct 624502 TTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 624561
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | ||||| |||||
Sbjct 624562 CTTACCAGTCAAAGTCTTAACGAA 624585
>seq9
Length=437923
Score = 161 bits (178), Expect = 2e-34
Identities = 158/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || ||||| | ||||| |||||||| ||||| || || || | || || || ||
Sbjct 77440 CAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTC 77381
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| ||||| || |||||||||||
Sbjct 77380 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTC 77321
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||||| |||||| || || ||||| | ||||| |||||||| ||||||||
Sbjct 77320 TTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 77261
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | |||||||| ||
Sbjct 77260 CTTACCAGTCAAAGTCTTGACAAA 77237
>seq242
Length=468
Score = 154 bits (170), Expect = 3e-32
Identities = 162/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || || || || ||||||||||| || || || | || || || ||
Sbjct 290 CAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTC 231
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|||||||||||| ||||| || || | |||||||| || || || || |||||||||||
Sbjct 230 TTCTAACTGCTTACCGGCAAAGATCAACCTTTGTTGATCTGGAGGGATACCTTCCTTGTC 171
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|| || || | ||| ||| ||||| ||||| | ||||| || || || ||||||||
Sbjct 170 CTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGT 111
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || || | ||||| || || ||||||||
Sbjct 110 TTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 78
Score = 114 bits (126), Expect = 2e-20
Identities = 122/161 (76%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 68301 CTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCT 68360
|| |||||||||| || || ||||| || || | |||||| ||||| || ||||| |||
Sbjct 466 CTACCATCTTCTAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCT 407
Query 68361 TCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAG 68420
|||||||||||||| || | ||| ||| || || ||||| | ||||| || || | |
Sbjct 406 TCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGG 347
Query 68421 GTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || || || || || |||||||| || |||||
Sbjct 346 GTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921616213609640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |