Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739355.1_202016-09- 21] 537 sequences; 12,259,592 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq10 113 5e-20 seq12 98.7 1e-15 seq242 89.7 5e-13 >seq10 Length=744155 Score = 113 bits (124), Expect = 5e-20 Identities = 522/816 (64%), Gaps = 23/816 (3%) Strand=Plus/Minus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTT- 132683 || || || || ||||| || || ||||||| ||| ||| ||||| |||||||| Sbjct 388293 TTTTCGAAGAAGTTAGTCTTACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTT 388234 Query 132684 --GGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | ||| ||| | |||| | |||| || | || | ||| |||||||| |||||| Sbjct 388233 TCGACCTTGTAGTATTTCTTGTTACCGAA-AG--CAACCAACAGTCTGTCGGCGACGAAC 388177 Query 132742 TCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCG 132801 || | |||||| ||| || || | || |||| | || || | || || Sbjct 388176 TCAACGTATTGGTTCATTAAGTCAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC 388117 Query 132802 GTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCG 132861 || | | ||| || || | || || |||||||| |||| ||| || | | Sbjct 388116 AAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGG 388057 Query 132862 -CTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTC 132920 || | ||| | |||||| ||||| |||||| ||||||||| ||||| || || Sbjct 388056 TCTGGTTTGTT-CTTCAAATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTC 387998 Query 132921 GTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAG 132980 ||| || | || | ||||||| || || || |||||||| | || | ||||| | Sbjct 387997 GTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAA 387938 Query 132981 CCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCAC 133040 ||| || |||| ||| || || || || ||||| || || | || || || || || Sbjct 387937 CCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAAC 387878 Query 133041 CAGGCGCTCGCCGAACGTGGCTTCTTTG-CTGGCGATCCAGCGCAGCGCCCATTCGGCCT 133099 || | || || ||| ||| || | || | ||||| | | ||||||||||||| Sbjct 387877 TAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGA-ATCCATCTTAAAGCCCATTCGGCCT 387819 Query 133100 TTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTT---TCTCTTCCG 133156 | || || || || || | ||||| || ||||| || || | |||| | Sbjct 387818 TCTCACCGATTTCTGGGATGGTGTGAATGGCATTGAACAA---GAATTCACTTTCTTTAG 387762 Query 133157 AGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGG 133216 | | |||||| ||||| | || || |||| ||||| | || || || Sbjct 387761 GGTCCTTGATGTAGGTATCGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCA 387702 Query 133217 CGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCT 133276 |||||| || ||||| || | | ||||| | || ||||| | ||| | Sbjct 387701 TGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTT 387642 Query 133277 CGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG- 133335 | |||| ||||| || || || ||||| |||||||||||||| || || || | Sbjct 387641 CAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAAC--TCTGGA 387584 Query 133336 -ATGAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAGTCGCGCGTGTCCTTGGACAG 133391 |||||| | |||||| ||||||| | | |||||| | | ||||| |||| Sbjct 387583 AATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAA 387524 Query 133392 GTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 || | || || ||||||| || || || ||||| Sbjct 387523 ATCAATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGC 387488 >seq12 Length=1044005 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || || ||||||||||| | || || || || || Sbjct 72155 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 72096 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||| ||||||| ||||| || || || || | || || Sbjct 72095 GACACGATCGATAACG-TTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCA 72037 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| || | || | || || || ||||| || |||| | ||| | |||||||| Sbjct 72036 ACAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 71977 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || || || |||||| || | |||||||| || Sbjct 71976 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 71929 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| || || || || || || ||| | || || || | || Sbjct 71699 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 71640 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||| || | || || ||||| || || || | || || Sbjct 71639 GACACTATTGACAACGTCAAAAGTAAGATTCAA-GATAAAGAAGGTATCCCTCCGGATCA 71581 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| | | |||| || || || || || || || | | ||| | |||||||| Sbjct 71580 ACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAA 71521 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || || || |||||| || | |||||||| || Sbjct 71520 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 71473 >seq242 Length=468 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || || ||||||||||| | || || || || || Sbjct 78 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 137 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||| ||||||| ||||| || || || || | || || Sbjct 138 GACACGATCGATAACG-TTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCA 196 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | || || || ||| | || |||| | ||| | |||||||| Sbjct 197 ACAAAGGTTGATCTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACCTTGTCTGACTACAA 256 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || || || |||||| || | |||||||| || Sbjct 257 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500169442590080