Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739495.1_202016-09-
21] 389 sequences; 12,154,501 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq9 105 6e-18
seq11 96.9 3e-15
seq12 86.0 6e-12
>seq9
Length=440203
Score = 105 bits (116), Expect = 6e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837
||||| || || || ||||| || | ||||| | ||| | ||||| ||||| ||
Sbjct 74834 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 74893
Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897
|| | ||||| ||||||| ||||| ||||| || || || || ||||||||| |
Sbjct 74894 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 74953
Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957
|| | | || || ||| | ||||| | ||||| | | ||||| ||||||||||||
Sbjct 74954 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 75013
Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| ||| | || | ||| ||||| | ||||| ||
Sbjct 75014 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 75051
>seq11
Length=646713
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837
|| || || || || ||||| || | ||||| | ||| | ||||| ||||||||
Sbjct 619574 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 619515
Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897
|| | ||||| ||||| ||||| ||||| || || || || ||||||||| |
Sbjct 619514 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 619455
Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957
|| | | || || ||| | ||||| | ||||| | ||||| ||||| ||||||
Sbjct 619454 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAA 619395
Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| ||| | ||| ||||| ||||| | ||||| ||
Sbjct 619394 GAATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGG 619357
>seq12
Length=1058493
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || || || || || || ||| | || || | ||| | ||||| |
Sbjct 60304 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 60245
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| |||||||| | || || || ||| ||||| ||||| || ||||| ||||||
Sbjct 60244 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 60185
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|||||| | || | | ||| || || || ||||| | ||||| | || || |||
Sbjct 60184 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 60125
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| || || || || | ||||| || || || || ||||| ||
Sbjct 60124 ATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGG 60078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478660072504080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |