Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739495.1_202016-09- 21] 389 sequences; 12,154,501 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq11 109 9e-19 seq9 107 3e-18 seq12 87.8 3e-12 >seq11 Length=646713 Score = 109 bits (120), Expect = 9e-19 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 146040 TTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATT 146099 ||| | || || || || || || || || ||| | || || ||| | || || ||| Sbjct 619574 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 619515 Query 146100 CAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTC 146159 | ||||| || || || ||| || ||||| || ||||| || ||||||||| | Sbjct 619514 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 619455 Query 146160 ATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAA 146219 || ||||| ||||| ||||| || || |||||| || | || || || || |||||| Sbjct 619454 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAA 619395 Query 146220 GAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 ||||| ||| | ||||| || || |||||||||| |||| Sbjct 619394 GAATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGGTA 619355 >seq9 Length=440203 Score = 107 bits (118), Expect = 3e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105 || || || || || || || || ||| | || || ||| | || |||||| | ||| Sbjct 74840 AAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAAT 74899 Query 146106 GTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTT 146165 || || || || ||| || ||||| || ||||| || ||||||||| | || ||| Sbjct 74900 GTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTT 74959 Query 146166 GCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCG 146225 || ||||| ||||| || || |||||| || | || || || || ||||||||||| Sbjct 74960 GCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAATCC 75019 Query 146226 ACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 ||| | || ||||| || |||| ||||| |||| Sbjct 75020 ACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTA 75053 >seq12 Length=1058493 Score = 87.8 bits (96), Expect = 3e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || || || || ||||| || || | || || ||| | || Sbjct 60303 TGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCCG 60244 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | || || || ||||| ||| || ||||| || || || ||||||| Sbjct 60243 ATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAAC 60184 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || ||||| ||||| || |||| || ||||||| | | ||||| || | Sbjct 60183 AAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAACA 60124 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || || || || || | ||| | || || | ||||||| |||| Sbjct 60123 TTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTA 60076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786162577265880