Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739545.1_202016-09- 21] 400 sequences; 12,187,763 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq5 244 9e-60 seq9 179 3e-40 seq10 161 9e-35 seq12 111 1e-19 seq11 86.0 6e-12 >seq5 Length=565905 Score = 244 bits (270), Expect = 9e-60 Identities = 417/600 (70%), Gaps = 6/600 (1%) Strand=Plus/Minus Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400 ||| || || |||| |||||||| || ||||||||||| ||||| || | || || Sbjct 297633 TTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACG 297574 Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460 | |||||||| ||| |||||| | | ||| | ||| || || | || |||||||| Sbjct 297573 AATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCA 297514 Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520 || || ||||||| ||||||||| || ||||| ||||| || ||||| || || ||||| Sbjct 297513 TGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACG 297454 Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580 ||| ||||| ||| | || | | ||| || | | |||||| || | ||| | || Sbjct 297453 GGCGGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACC 297394 Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 || | ||||| ||| |||| ||| || | || | ||| || || || | | Sbjct 297393 AGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGT 297334 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 ||| || |||| || |||| |||| |||||||| || |||||||| |||||| || Sbjct 297333 TTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTT 297274 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | || ||||||||||| || |||||||| | ||| || ||| |||| ||||| || Sbjct 297273 CATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGT 297214 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820 || |||||| ||||| ||| ||||| | || ||||| || | || || || Sbjct 297213 TGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTC 297154 Query 23821 AATGTCCTCT-CCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGA 23879 || | |||| ||||| || || | ||||| | ||| || | | ||| || | ||| Sbjct 297153 GATAT-CTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGG 297095 Query 23880 C--CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937 | | ||| ||||| ||| | | | ||| ||||||| || |||||||| |||||||| Sbjct 297094 CCACTTGA--CCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATA 297037 >seq9 Length=433770 Score = 179 bits (198), Expect = 3e-40 Identities = 426/641 (66%), Gaps = 2/641 (0%) Strand=Plus/Plus Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400 || ||| ||| |||| |||||||| || ||||||||||| ||||| || | || || Sbjct 235963 TTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCTCTTGCACG 236022 Query 23401 CACCTCCTCTTTGCC-GGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459 | || || || || ||||| ||| | | ||| | |||||| || | || ||||||| Sbjct 236023 AATTTCTTCCTTACCATGTGTT-TTTCTGATATCGACAAAGTCGAAGATATCTGCATGCC 236081 Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAAC 23519 | ||||| | | ||| ||| || || || |||||||| || || ||||| || || |||| Sbjct 236082 ATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCCACATAAC 236141 Query 23520 GGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGC 23579 |||| || || ||| | || | | ||| || | | ||||| || | ||| | Sbjct 236142 GGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGTAC 236201 Query 23580 CCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCG 23639 | || | | |||||| | | || | ||||| | || | ||| | || || | | Sbjct 236202 CAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCACCTGCAG 236261 Query 23640 ATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTT 23699 ||| || ||||| || |||| ||||| ||| || || || || ||||| ||| || | Sbjct 236262 TTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGTCATCCT 236321 Query 23700 TGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTG 23759 | | || | |||||||| ||||||||||| | | |||||| | || ||| | | Sbjct 236322 TCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTGAATAAAG 236381 Query 23760 TCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCAT 23819 | ||| ||||| || ||||||| |||||| | ||| || || | | | | | Sbjct 236382 TTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGCACAGATT 236441 Query 23820 CAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGA 23879 | || || || || ||||| | || || ||||| | || | ||||| | || Sbjct 236442 CGATATCGCTACCATGGATACCTAGCGCCACACGCATTACCAAATGCTGAGGACGTTCTG 236501 Query 23880 CCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGT 23939 || | ||||| | | | | || || ||||| | || || || ||||| ||||| Sbjct 236502 CCACTTCACCGTTCAGTCTTAGCAAGTACGAACGCTCCAGTGTCTTGAATCCGAAATACG 236561 Query 23940 CATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAA 23980 ||| | || || | ||||| ||| |||||||| |||||| Sbjct 236562 TATACTGGAAATCCCTATCGTACACGATGGCCGAGTTCAAA 236602 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 ||| || |||||| |||| || || || ||||| | || |||||| | || |||| | | Sbjct 70908 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 70967 Query 31261 CGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTC 31319 || | ||||| || ||| | | |||||||||| | || || ||||| || | Sbjct 70968 TGACAATGTCAAGTCAAAGATTCAAG-ACAAGGAAGGTATCCCACCTGACCAACAAAGAT 71026 Query 31320 TAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAA 31379 | || || ||||| || || ||||||||| || || || || || |||||||||| Sbjct 71027 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAA 71086 Query 31380 AAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||||| ||| | || | || | ||| |||| || |||| Sbjct 71087 AAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTA 71128 >seq10 Length=750834 Score = 161 bits (178), Expect = 9e-35 Identities = 544/835 (65%), Gaps = 19/835 (2%) Strand=Plus/Plus Query 57591 GCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGG 57650 || ||||| || || ||||||| |||||| | || ||||||||||| | || ||| Sbjct 391913 GCCGAAGCTTCTTTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATCCATGACTGG 391972 Query 57651 GATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCC 57707 | | | || || |||||| ||| ||| || | || ||||||||| Sbjct 391973 AACAACAGAATGAACGAGAACGAGAGATTTTTCATTTCCAGAGTTCTTGCCTTTTTCGCC 392032 Query 57708 GCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTG 57767 || || || ||||||||||| || || ||||| |||| || || ||||| ||| | Sbjct 392033 GCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTCCAAATT 392092 Query 57768 ACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATG 57827 | ||||| | | || ||||| || ||| | |||||||| | || || |||| Sbjct 392093 CCAGAGGCAAAGAGTTTCTACGGTTTCCAAATCATGATTGAAAATATTCACTCTGAAACT 392152 Query 57828 TATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGAC-TGTTCAA 57886 || || | | |||||||| ||| | |||||| | || || | | | ||||||| Sbjct 392153 TACTCCTTGTTGATCGATACCTACATCAAGGACCCTAAAGA-AAGTGAATTCTTGTTCAA 392211 Query 57887 CGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAA 57946 || || | || || || | |||| ||||||| || ||| | | | |||||| | Sbjct 392212 TGCCATTCACACCATCCCAGAAATCGGTGAGAAGGCCGAATGGGCTTTAAGATGGATTCA 392271 Query 57947 AAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATT 58006 | ||| ||| ||| | || || ||| | || || ||| || | |||||| | || Sbjct 392272 AGACGCTGACGCCTTGTTTGGTGAAAGACTAGTTGCCTTTGCCTCCATTGAAGGTGTCTT 392331 Query 58007 CTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCT 58066 || || || |||||| | || || ||| |||| || | || |||||||||| | Sbjct 392332 TTTCTCCGGTTCCTTTGCCTCCATTTTCTGGTTGAAAAAGAGAGGTATGATGCCCGGTTT 392391 Query 58067 GACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126 || ||| |||||| ||||| | | ||||| ||| | || || || ||||| ||| | Sbjct 392392 AACCTTTTCCAACGAATTGATCTGTAGAGACGAAGGTTTGCACACCGACTTTGCATGCTT 392451 Query 58127 AATGTACTCTCACATTGTCAATAAACC-GACGCGGGATCGCATCTTG--GACATTATCAC 58183 ||| | | || | || ||||| ||| | | | | ||| | ||| |||| Sbjct 392452 GTTGTTCGCCCATTTGAAGAACAAACCAGACCC---AGCCATTGTTGAAAAAATTGTCAC 392508 Query 58184 CGAGGCGGTCGCGATCGAA-AATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCG 58242 |||||| || | || ||| || || | || || ||| |||| || || |||| | Sbjct 392509 CGAGGCTGTGGAAATTGAACAAAGA-TACTTCTTGGACGCCTTACCAGTTGCTTTGCTAG 392567 Query 58243 GTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCG 58302 |||||||| ||| || ||| | ||| ||||||| || ||||||||||| ||| | | Sbjct 392568 GTATGAACGCTGACTTAATGAACCAATACGTTGAGTTCGTCGCCGACAGACTGTTGGTTG 392627 Query 58303 AACTGATTGGAGAGCGTCATTACAACACG---AAAAATCCGTTTGATTTTATGAATCTGA 58359 || | || | | ||| ||| | |||| || || ||||| ||| | | Sbjct 392628 --CT-TTCGGTAACAAGAAATACTACAAGGTCGAAAACCCCTTCGATTTCATGGAAAACA 392684 Query 58360 TCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414 |||| | | || ||||| ||||| |||||||| | |||| || || ||||| Sbjct 392685 TCTCCTTGGCCGGTAAGACTAACTTCTTCGAAAAGAGAGTTTCTGACTACCAAAA 392739 >seq12 Length=1056093 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || ||||| ||||| || || || ||| | || |||||| | ||| Sbjct 59881 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 59822 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | |||||| | ||| ||||||||||| | || || || || Sbjct 59821 GACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 59762 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || || || || || || |||||||| || || || ||||||||| Sbjct 59761 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 59702 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| ||||| || || | ||| |||| | ||| |||| || |||| Sbjct 59701 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTA 59653 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || |||||||||||||| |||||| | || || || || || ||| | || |||||| | Sbjct 495307 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 495366 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| | | || | ||||| | || ||||||||||| | || || ||| Sbjct 495367 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 495426 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || || | | || || ||||| || || |||||||| || ||| || ||| || Sbjct 495427 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 495486 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||| ||||| ||||| ||||| || |||| | ||| |||| || ||| Sbjct 495487 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGT 495537 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || ||||| |||||||| || || || ||| | || |||||| | || Sbjct 59425 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 59366 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | || || || ||| ||||||||||| | || || |||||| Sbjct 59365 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 59306 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || || || || || || | ||||| || || || || || || Sbjct 59305 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 59246 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||| || || |||||||| || || | || ||||||| |||| Sbjct 59245 ATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGTA 59197 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || ||||| ||||| || || || ||| | || |||||| | ||| Sbjct 59653 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 59594 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | |||||| | || || || ||||| | || || || || Sbjct 59593 GACACTATTGACAACGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 59534 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || ||||| || || | ||||| || || || || || ||| Sbjct 59533 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 59474 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| ||||| |||||||| |||| | ||| |||| || |||| Sbjct 59473 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGTA 59425 >seq11 Length=649863 Score = 86.0 bits (94), Expect = 6e-12 Identities = 151/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| |||||| |||| || || || ||||| | || |||||| | || |||| | Sbjct 622799 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 622740 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 || | ||||| | || ||||||||||| | || || ||||| || | | Sbjct 622739 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 622680 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || || ||||| || || ||||||||| || ||| | || || ||||| |||||| Sbjct 622679 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAA 622620 Query 31382 GAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| ||| | ||| |||| | ||| | || || |||| Sbjct 622619 GAATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGGTA 622580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445764171168000