Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739575.1_202016-09-
21] 430 sequences; 12,206,827 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq12 152 1e-31
seq11 140 8e-28
seq9 140 8e-28
>seq12
Length=1056499
Score = 152 bits (168), Expect = 1e-31
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||||||||| || || ||||||||||| || || | | ||| || || ||||| |||||
Sbjct 62253 GTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTG 62312
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || || ||||| | | ||||| || ||||| | ||||||||||||||||| ||
Sbjct 62313 CTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTT 62372
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| ||||| ||||| ||||| ||| ||||||||| | |||||| || || || ||
Sbjct 62373 CGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGT 62432
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| |||||| ||||| | ||||||
Sbjct 62433 CAAAGTCTTAACAAAGATCTGCAT 62456
Score = 138 bits (152), Expect = 3e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| ||||| || || ||||||||||| || || | | || || ||
Sbjct 497735 TCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 497676
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| ||||| || || ||||| | | |||||||||||| |||| ||||||||
Sbjct 497675 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 497616
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || || || || || |||||||| |||||| || || || ||
Sbjct 497615 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAAT 497556
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || || | |||||| || || | ||||| ||
Sbjct 497555 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 497517
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| |||||||| || ||||||||||| | || || || || |||||||| ||||| ||
Sbjct 62032 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 62091
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| || || | | |||||| || ||||||| ||||||||||| || || || |||
Sbjct 62092 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTG 62151
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
||||| || || ||||| || ||||||||| || || || ||||| || || |||||
Sbjct 62152 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 62211
Query 211098 TTTACAAACACCTGCAT 211114
|| || || | |||||
Sbjct 62212 TTGACGAAAATTTGCAT 62228
Score = 127 bits (140), Expect = 5e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
|| ||||| ||||| || | |||||||| || || ||||| ||||| | || || ||
Sbjct 62467 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 62526
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|| ||||| |||||||| || || ||||| | | |||||| || ||||| | ||||||
Sbjct 62527 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 62586
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
||||| || || || || ||||| |||||||| || || |||||| || | ||
Sbjct 62587 TTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTT 62646
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || | |||||| || || | ||||||
Sbjct 62647 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 62684
Score = 113 bits (124), Expect = 1e-19
Identities = 150/210 (71%), Gaps = 14/210 (7%)
Strand=Plus/Plus
Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964
||||||||||||||||||||| ||||| || || || |||| || || || ||||||||
Sbjct 61805 GACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 61864
Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024
|| ||||| || || || || | | ||| ||||| ||||||| | |||| | ||
Sbjct 61865 TAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAA----TACCTTTTACT- 61919
Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084
||| ||||| || || ||||| || ||||||||| || || || |||||
Sbjct 61920 ---------TTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTT 61970
Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| || || || | |||||
Sbjct 61971 CCCTGTTAGAGTTTTGACGAAAATTTGCAT 62000
>seq11
Length=648816
Score = 140 bits (154), Expect = 8e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | || | |||||| |||||||||||||| || || | || || || ||
Sbjct 621475 TCTCAAGACCAAATGTAAAGTGGATTCTTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 621534
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || || ||||| | | |||||||||||| || | ||||||||
Sbjct 621535 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 621594
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || || || || ||||||||||| |||||| || | ||||||
Sbjct 621595 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 621654
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| || || | |||||| || ||
Sbjct 621655 GGTCTTACCAGTCAAAGTCTTAACGAA 621681
>seq9
Length=437574
Score = 140 bits (154), Expect = 8e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| | |||||| |||||||| ||||| || || | | ||| || ||
Sbjct 73943 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 73884
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || || ||||| | | |||||||||||| || | ||||||||
Sbjct 73883 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 73824
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || |||||| || || || || || |||||||| |||||| || | ||||||
Sbjct 73823 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 73764
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| || || | |||||| |||||
Sbjct 73763 GGTCTTACCAGTCAAAGTCTTGACAAA 73737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159145613796950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |