Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739575.1_202016-09-
21] 430 sequences; 12,206,827 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq12 152 1e-31
seq11 118 3e-21
seq9 111 4e-19
>seq12
Length=1056499
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| |||||||| ||||| || || || ||||| ||||| ||| || |||
Sbjct 62225 CAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGAC 62166
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||||||| || ||||| ||||| ||||| || ||||| || || |||
Sbjct 62165 ACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAA 62106
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || || ||||| || || || ||||| || || || || | ||||||||| |
Sbjct 62105 AGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATT 62046
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| ||||| || || ||||| | || |||||| | |||
Sbjct 62045 CAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGA 62007
Score = 125 bits (138), Expect = 2e-23
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||| | || || || || || ||||| || || ||| || |||
Sbjct 497523 CAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCTGAC 497582
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| ||||| || ||||| ||||| || || || ||||| |||
Sbjct 497583 ACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAA 497642
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || || || | |||||||| || ||| | |||| || ||| ||
Sbjct 497643 AGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATC 497702
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || || || | || |||||| | |||
Sbjct 497703 CAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGA 497741
Score = 111 bits (122), Expect = 4e-19
Identities = 151/212 (71%), Gaps = 14/212 (7%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| |||||||| ||||| || || || ||||| ||||| ||| || |||
Sbjct 61997 CAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGAC 61938
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||| |||||| | |||| || ||||| |||||||||
Sbjct 61937 ACTATTGACAACGT----CAAAAG----------TAAAAGGTATTCCTCCAGACCAGCAA 61892
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || || ||||| || || || |||||||| || || || | || || || |
Sbjct 61891 AGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAATATT 61832
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAG 178135
||||| || || || || || ||||| |||||
Sbjct 61831 CAAAAGGAGTCCACTCTTCACCTTGTCTTGAG 61800
>seq11
Length=648816
Score = 118 bits (130), Expect = 3e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || ||| | || || || || ||||| | || || ||| || ||||||||
Sbjct 621681 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 621622
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || ||||| ||||| || ||||| ||||| ||||| || ||||| ||| || |
Sbjct 621621 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 621562
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109
||||| || || || || | ||||| || || ||||| | || || ||| ||||||||
Sbjct 621561 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAA 621502
Query 178110 GAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| || | ||| | || |||||| | |||
Sbjct 621501 GAATCCACTTTACATTTGGTCTTGAGATTAAGA 621469
>seq9
Length=437574
Score = 111 bits (122), Expect = 4e-19
Identities = 155/215 (72%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988
||| || || ||| | || || || || ||||| | || || ||| || ||||| ||
Sbjct 73736 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 73795
Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048
|| || ||||| ||||||||| ||||| ||||| ||||| || ||||| ||| || |
Sbjct 73796 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 73855
Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC-GATTATAACGTCCAAA 178107
||||| || || || || | ||||| || || || |||| | || || ||| | ||||
Sbjct 73856 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAAC-CTTGTCTGACTACAACATTCAAA 73914
Query 178108 AAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||||| || |||| | || |||||| | |||
Sbjct 73915 AAGAATCCACTTTGCACTTAGTCTTGAGATTGAGA 73949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203724568193420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |