Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739595.1_202016-09- 21] 334 sequences; 12,113,438 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq9 203 8e-47 seq5 194 4e-44 seq15 131 4e-25 >seq9 Length=426033 Score = 203 bits (224), Expect = 8e-47 Identities = 1020/1596 (64%), Gaps = 47/1596 (3%) Strand=Plus/Minus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 ||||| || |||||| || |||||||||| || | ||||||||| | ||| | || Sbjct 236680 GAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTAGGTATCCATGGTAGCGATATCGAA 236621 Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCACGCCACGCCAA 363565 | | | | | || ||||| || | || | | || ||||| ||||| | |||| Sbjct 236620 TCTGTGCTGAAGACTTATAA--TTTGATGTCGTTAAGATACTTCACTCACGCTTCCCCAA 236563 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAAATG 363624 | | | ||| ||||| || | |||| || |||||||| || |||||| | ||| Sbjct 236562 CTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATG-TTTCTTAATTGCCATG 236504 Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684 ||||| || || ||||| ||||| | ||| || | || | |||||| | |||||||| Sbjct 236503 AAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAA 236444 Query 363685 AATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCG 363743 | |||||| || ||||| | ||| |||| | ||| | |||| ||| || || Sbjct 236443 ACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCCACAGGTTC-TTATAT-CG 236386 Query 363744 C-GGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACT 363801 | || || || |||| | || ||| || |||| ||| ||||||| || | |||||| Sbjct 236385 CTGGTACCAACGG-TACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATACT 236327 Query 363802 GCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAG 363861 || | || || ||||||||||| ||| | || || || || | | | ||| Sbjct 236326 GCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCTGGTGCTTTCGCCCTTTTCTTGGAG 236267 Query 363862 CCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACG-GGAAAAGAGGA 363920 || ||||| ||||| || || ||| | || || | |||||||| || || || || Sbjct 236266 CCATGGCATGCAGATATCTTCGACTTTGTCGATATCAG-AAAAACACATGGTAAGGAAGA 236208 Query 363921 ATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT 363980 | | |||||| | ||| ||||| ||| || ||| | |||| | ||| ||||| || || Sbjct 236207 AATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATCCCTGATCTTTTCATGAAACGTGT 236148 Query 363981 GGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCC-AGGTCTTTCCGATG 364039 | | | | | |||| | | |||| || || || || |||| | |||| Sbjct 236147 TCAAGAGGATGGGCCTTGGACTTTATTTTCACC-CAGTGCTGCCCCAGGTTTAGATGATG 236089 Query 364040 TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC-TCGT 364098 | |||||||| || | || | ||||| || ||| || ||| | | | || Sbjct 236088 TGTGGGGTGATGAATTTGAAGAACTATATACTCGTTACGAA----AGAGAAGGTCGTGGT 236033 Query 364099 AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158 || |||||| || || ||| | |||| |||||| || | | |||| || ||||| Sbjct 236032 AAAACAATTAAAGCCCAAAAGTTGTGGTATGCCATTTTGCAAGCACAGACAGAAACAGGT 235973 Query 364159 ACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGT 364218 ||||| | ||| | || || || | || ||| | ||| | ||||| ||| || | ||| Sbjct 235972 ACACCTTTCATGGTTTATAAGGACGCATGTAACAGGAAGACAAACCAACAGAACTTAGGT 235913 Query 364219 ACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277 || || || | | ||| ||||| || || | ||||| || | || || || || Sbjct 235912 ACTAT-CAAATCATCTAACTTATGTTGTGAAATCGTCGAATATTCCTCCCCGGATGAAAC 235854 Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---------AAAAGATGG 364328 ||| || ||||| | || || || || || || || || || | ||||||| Sbjct 235853 TGCAGTTTGTAATTTAGCTTCTATTGCCCTACCAGCATTCGTTGAGGTTTCAGAAGATGG 235794 Query 364329 TACTTTTGACCACCAGCATCTTTA-----TG-ACGTAAC--CTA---TCATGCTACTTGC 364377 || || | | || | | || ||| | ||| |||| |||| | Sbjct 235793 TAAAACTGCAAGCTATAATTTCGAGAGATTGCACGAGATTGCTAAAGTCAT--TACTCAC 235736 Query 364378 AATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAAT 364437 || | ||| ||||||||| ||||| |||||| |||| || || ||| ||| Sbjct 235735 AACTTGAACAGAGTTATCGACCGTAATTACTATCCAGTTCCCGAGGCTAGAAATTCAAAT 235676 Query 364438 ATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC 364497 ||| ||| | || |||| ||||||||| |||||| | || || || ||||||| | Sbjct 235675 ATGAAGCATAGACCTATTGCTCTTGGTGTCCAGGGCTTGGCCGATACTTATATGATGTTG 235616 Query 364498 AAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATG 364557 | | ||||| ||| || |||| |||||| || | ||||| ||||| || Sbjct 235615 CGTCTACCCTTTGAATCGGAAGAAGCTCAAACTCTAAACAAACAAATCTTCGAAACTATT 235556 Query 364558 TATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCA-AAAACCAAGGGAAAGTACTCTAC 364616 || ||| | | || || ||||| ||||| |||| |||| ||| || ||||| Sbjct 235555 TACCATGCTACTCTTGAAGCCTCCTGTGAATTGGCCCAAAAAGAAGGTAAA-TATTCTAC 235497 Query 364617 TTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCC 364676 || ||| || || || ||| |||| | || || || ||| | ||||| | | || Sbjct 235496 TTTTGAAGGTTCTCCAGCTTCCAAGGGTATTTTACAATTCGATATGTGGAACGCTAAACC 235437 Query 364677 ATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAA 364736 || || | ||| | ||||| || || | || || || ||||| | || Sbjct 235436 ATTTGGCATGTGGGATTGGGAAACCTTAAGAAAGGACATTGTTAAACATGGGTTAAGAAA 235377 Query 364737 CTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGA 364796 ||| | || || || ||||| || || || ||| | || || || || | || || Sbjct 235376 CTCTTTGACTATGGCACCAATGCCAACCGCCTCAACTTCCCAAATTCTTGGTTATAATGA 235317 Query 364797 GTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCC 364856 || |||||||| | || || | || || || || || || || || ||||| | Sbjct 235316 ATGTTTCGAACCAGTGACCTCAAACATGTACTCTCGTCGTGTCCTGTCTGGTGAATTCCA 235257 Query 364857 GGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCAT 364916 || |||||| || || | ||| | ||||| || | |||| ||| || || Sbjct 235256 AGTTGTTAATCCATATTTACTACGTGATTTAGTCGACCTGGGTATTTGGGATGATAGTAT 235197 Query 364917 GAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGA 364976 ||| | ||| | || | ||||||||| | || | | ||| | ||| |||| Sbjct 235196 GAAACAATATCTAATTACACAAAATGGTTCTATTCAAGGCTTACCAAATGTGCCACAAGA 235137 Query 364977 TCTGAAGCCTATTTACAAAACCGTATGGGAAATTTC 365012 ||||| | ||||||||||| |||||||| || Sbjct 235136 ATTGAAGGAATTATACAAAACCGTCTGGGAAATCTC 235101 >seq5 Length=566028 Score = 194 bits (214), Expect = 4e-44 Identities = 697/1076 (65%), Gaps = 57/1076 (5%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || |||||| | ||||| ||| |||||| || |||| || || || ||||| ||| Sbjct 301483 TTTACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCT 301542 Query 363607 TGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 || |||||| | |||||||| || || |||||||| || | ||||| | ||| | Sbjct 301543 TG-TTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGA 301601 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725 |||||| | |||||||| | ||| || || |||||| || ||||| || ||||| | Sbjct 301602 ATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTC 301661 Query 363726 ACAGAACAG----TTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATG 363780 | || | ||||||| || ||| || |||| | || || | |||| ||| Sbjct 301662 A----ACTGGTTCTTACATTGCTGGTACAAACGG-TACTTCTAACGGTTTAATTCCTATG 301716 Query 363781 CTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAG 363838 ||||||| || | || ||||| | || || ||||||||||| | |||| | | Sbjct 301717 ATTCGTGTTTTCAATAACACTGCCCGTTATGTTGACCAGGGTGGTAATAAAAGACC--TG 301774 Query 363839 GGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCC 363898 | |||||||| | || || || || ||||| ||||| ||||| ||| |||| | Sbjct 301775 GTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATATTTGATTTTATTGATATTA 301834 Query 363899 GGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958 |||| ||| || ||||||||| | |||||| | ||| ||||| ||| || ||| || Sbjct 301835 GGAAGAACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTC 301894 Query 363959 CTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACG 364018 |||| | ||| |||||||| || || | | | || ||| || | || | ||| Sbjct 301895 CTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCAACAT 301954 Query 364019 AATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATG 364078 | ||| ||| | |||| | |||||||| | || |||||||| || | Sbjct 301955 CAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACG 302014 Query 364079 AATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137 | || ||| | | | ||||||| || || || || |||||| | |||| || Sbjct 302015 A----GAAAGAAGGTCGTGGTAAGACTATCAAAGCCCAAAAATTATGGTATTCCATTTTG 302070 Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197 || | || | ||| || || ||||| | | | ||||| ||| | || ||| | || Sbjct 302071 GAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAA 302130 Query 364198 TCCAACCAGCAGCACCTTGGT----ACAATTCAGCAGAGCAACCTATGTACCGAGATTAT 364253 || || || | || | ||| ||| ||| || ||| |||| || ||| | Sbjct 302131 TCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCA----AACTTATGCTGTGAAATTGT 302186 Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313 ||||||| | ||||| || || ||||| || |||||| | || || | || | || || Sbjct 302187 TGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGC 302246 Query 364314 GT---TTGTAA------AAGATGGT---ACTTTTGACCAC---CAGCATC-------TTT 364351 | ||| || | |||||| |||| |||| || | || | Sbjct 302247 ATTCATTGAAACTTCTGAGGATGGTAAGACTT----CCACATACAACTTCAAAAAATTAC 302302 Query 364352 ATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATC 364411 |||| | | | || |||| | ||| | ||| || || || ||||| || | Sbjct 302303 ATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAATTACTACC 302362 Query 364412 CAATTCCTGAAGCCGAG-CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAG 364470 | || |||| |||| || |||||| | ||| | || |||| | | ||||| || Sbjct 302363 CTGTTGAAGAAG-CGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTGTTCAA 302421 Query 364471 GGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTT 364530 || ||||||||| ||| ||| || | || |||||||||| || || ||| | Sbjct 302422 GGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTG 302481 Query 364531 CTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGA 364586 ||||||| | |||||||| || || ||| |||| | ||| ||||| ||||| Sbjct 302482 CTAAATATCCAAATCTTTGAGACTATTTATCATGCCTCCATGGAAGCTTCTTGTGA 302537 >seq15 Length=1056678 Score = 131 bits (144), Expect = 4e-25 Identities = 341/515 (66%), Gaps = 34/515 (7%) Strand=Plus/Minus Query 111419 TGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTC-G 111477 ||| || |||||||| || |||||||| ||||| | | ||||| || ||| || | Sbjct 453809 TGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATA-AGATGGGGTTCAAAG 453751 Query 111478 ACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAG 111537 | | ||| ||| ||||| || || ||||| |||||||||||| | || |||||||| Sbjct 453750 ATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATTTCAATGGAGGCATTTTGGTGCTA 453691 Query 111538 ACTACAAAACCATGC-ACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTC 111596 | ||||| || ||| | ||| ||| | ||| || | ||||||||| | | || Sbjct 453690 AATACAAGACG-TGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAGGTT 453632 Query 111597 ATTGATCAAATTAAGAACAA-CCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCC 111655 ||| || || |||||| || ||| || | | | || ||||||||||| |||||||| Sbjct 453631 ATTCATAAACTTAAGACAAATCCCTACGA-TAGAAGAATCATTATGAGTGCCTGGAACCC 453573 Query 111656 AAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATG---- 111711 | || || || |||||||| | |||||||| ||| || | | ||||| |||| Sbjct 453572 AGCTGATTTTGACAAAATGGCTTTGCCACCATGCCATATTTTTTCACAGTTCTATGTCAG 453513 Query 111712 --TACACGACG--------GGAT-------------GCTTTCATGCCAAATGTATCAGCG 111748 | | | | | |||| ||||||||| | |||| || || Sbjct 453512 TTTCCCCAAAGAAGGAGAAGGATCCGGTAAGCCCCGCCTTTCATGCTTATTGTACCAACG 453453 Query 111749 ATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTG 111808 ||| ||||| || | || || |||||||| |||||| || || | | ||| | Sbjct 453452 TTCTTGCGATATGGGGTTGGGAGTACCGTTTAACATTGCATCATATGCTTTGTTGACTAG 453393 Query 111809 CTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGC 111868 | || ||| | || | | | || ||||| |||||||| | | || ||||| Sbjct 453392 AATGATTGCTAAAGTTGTCGACATGGAGCCAGGTGAGTTCATTCATACTTTGGGGGATGC 453333 Query 111869 GCATGTTTACACAAACCACATTGATGCACTTAAAA 111903 |||||||| | | ||||||||||||| ||| ||| Sbjct 453332 ACATGTTTATAAAGACCACATTGATGC-CTTGAAA 453299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303348022461188