Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739595.1_202016-09-
21] 334 sequences; 12,113,438 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq333 122 2e-22
seq12 118 2e-21
seq9 105 2e-17
seq11 95.1 3e-14
>seq333
Length=761
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474
|||| ||||||||| ||||| ||||||||||| | |||||||| | || || || |||
Sbjct 695 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 636
Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534
||||| || ||||| ||||| || || | | |||||||| ||| ||| |||||
Sbjct 635 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 576
Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594
|| ||||| || ||| ||| || | ||||| | | ||| || || | || ||
Sbjct 575 TCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 516
Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || || || || |||||||||||
Sbjct 515 GTCTTACCTGTCAGTGTCTTGACAAAAATTTG 484
Score = 114 bits (126), Expect = 3e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | ||| ||||| || |||||||||| ||||||||||| ||| || || ||
Sbjct 468 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 409
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||| || ||||| || || || || | | ||| || |||||| || ||||||
Sbjct 408 ATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTT 349
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| |||||||| || ||| || | |||| | | ||| || || | || ||
Sbjct 348 ATCTTGAATCTTACTTTTGACGTTGTCAATATTGTCGGAAGATTCAACCTCTAGGGTTAT 289
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || || |||||||| || ||||||||
Sbjct 288 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTG 256
>seq12
Length=1064606
Score = 118 bits (130), Expect = 2e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | ||| ||||| || |||||||||| ||||||||||| ||| || || ||
Sbjct 63810 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 63869
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||| |||||||| ||||| ||||| | | ||| || || ||| || |||||
Sbjct 63870 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 63929
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| || || ||| ||| |||| ||||| | | ||| || || || |||||
Sbjct 63930 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 63989
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| || | ||| || ||||| || ||
Sbjct 63990 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTG 64022
Score = 113 bits (124), Expect = 1e-19
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474
|||| ||| ||||| ||||| ||||||||||| | |||||||| | || || || |||
Sbjct 63583 CTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 63642
Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534
||||| || || || ||||| || || | | |||||||| ||| ||| |||||
Sbjct 63643 TCTTCTAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 63702
Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594
|| ||||| || ||| ||| || | ||||| | | ||| || || | || ||
Sbjct 63703 TCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 63762
Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || || || || |||||||||||
Sbjct 63763 GTCTTACCTGTCAGTGTCTTGACAAAAATTTG 63794
Score = 86.0 bits (94), Expect = 1e-11
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989
||| | | ||||| || || ||||| ||||||||||| || |||||| |||| ||||||
Sbjct 496132 AAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACA 496191
Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024
|||| || || |||||||| ||| | || ||||||
Sbjct 496192 TCCAAAAGGAATCTACTCTACACTTGGTCTTGAGA 496226
>seq9
Length=426033
Score = 105 bits (116), Expect = 2e-17
Identities = 148/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| | ||| || || ||||| | ||||||||||| ||| || || ||
Sbjct 70986 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 70927
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||| ||||| || || ||||| | | || ||||| || || |||||
Sbjct 70926 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 70867
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| ||||||||| ||| || || | ||||| | | ||| || ||||| |||||
Sbjct 70866 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 70807
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAA 199621
|||||||| || | ||| || ||||||
Sbjct 70806 GGTCTTACCAGTCAAAGTCTTGACAAAA 70779
>seq11
Length=647628
Score = 95.1 bits (104), Expect = 3e-14
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | || | ||| || |||||||||| ||||||||||| | ||| || ||
Sbjct 620356 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 620415
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||| ||||| || || ||||| | | || ||||| || || |||||
Sbjct 620416 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 620475
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || ||||| ||| || || | |||||| | | ||| || ||||| |||||
Sbjct 620476 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 620535
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAA 199620
|||||||| || | ||| || || ||
Sbjct 620536 GGTCTTACCAGTCAAAGTCTTAACGAA 620562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178916554952378
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |