Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739595.1_202016-09- 21] 334 sequences; 12,113,438 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5 266 4e-66 seq9 129 7e-25 seq2 91.5 2e-13 >seq5 Length=566028 Score = 266 bits (294), Expect = 4e-66 Identities = 890/1367 (65%), Gaps = 36/1367 (3%) Strand=Plus/Plus Query 111627 ATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGAC 111686 ||| | ||||| | || ||||| || |||||| || ||| ||| || || || || Sbjct 301405 ATGAGAGTCGCACTAGGCATCCACGGTAGAGATATCGAGGCTGCTTTAGAAACGTATAAC 301464 Query 111687 AAGATGTCCCGTGG-TATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACC 111745 |||||| | ||| || || |||| | ||||| | ||||| || ||||| || Sbjct 301465 TTGATGTCTCTAAAATATTTTACTC-ACGCCTCTCCAACGTTGTTCAATGCCGGTACTCC 301523 Query 111746 AAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCAT 111805 || ||| ||||||||| ||||||| | |||| | |||||||| || ||| | || || Sbjct 301524 AAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGAT 301583 Query 111806 TTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCA 111865 ||||| ||| | | |||||||| || || || ||||||||||| || | || Sbjct 301584 TTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACA 301643 Query 111866 CATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGTACAAATGGTCAATCAGATG 111924 |||||| | | | | ||| || || ||| |||||||| ||| || | | Sbjct 301644 TATCCATAACATTCGTTC-AACTGGTTCTTACATTGCTGGTACAAACGGTACTTCTAACG 301702 Query 111925 GTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGC 111984 || | ||||| ||| |||| || || || ||| || || ||||| |||| | ||| Sbjct 301703 GTTTAATTCCTATGATTCGTGTTTTCAATAACACTGCCCGTTATGTTGACCAGGGTGGTA 301762 Query 111985 GTCGCAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAG 112040 | ||| || | | || | || || || |||||||| || ||||| | || Sbjct 301763 ATAA-AAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATATTTGAT 301821 Query 112041 TTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCC-GCGATCTCTTCTC 112099 || |||| | | ||||| ||| | ||||| || ||| | ||| | ||| | Sbjct 301822 TTTATTGATATTAGGAAGAACCACGGTAAAGAGGAAATTCG-TGCAAGAGATTTGTTCCC 301880 Query 112100 CGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCT 112159 ||||| |||||||| ||||| ||||||||| | || || || | ||| | ||| | | Sbjct 301881 TGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATT 301940 Query 112160 CTTTTGTCCAGACAAG-GCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCC 112218 || | |||| ||| || || ||| | |||| ||||| |||||||| || | Sbjct 301941 ATTCTCTCCA-ACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTC 301999 Query 112219 TCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGT 112278 | || || |||||| ||||| |||| | | ||| | ||| | | | Sbjct 302000 TATATACCCGCTACGAGAAAGAAGGTCGTGGTAA---GACTATCAAAGCCCAAAAATTAT 302056 Query 112279 GGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACG 112338 || | | ||| | | ||||||| || ||||||||||| | | ||||||| || | Sbjct 302057 GGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATG 302116 Query 112339 CCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTA 112398 | |||||| ||| ||||||||| || || ||||| |||||| || ||| | || Sbjct 302117 CTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCAAACTTATGCT 302176 Query 112399 CAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCG 112458 ||||| | |||| ||| |||||| || ||||| |||||| | || || | | Sbjct 302177 GTGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTG 302236 Query 112459 CTCTCCCC------------AAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 112506 | | || | | || |||| |||| |||| | | ||| Sbjct 302237 CCTTACCAGCATTCATTGAAACTTCTGAGGATGGTAAGACTTCCACATACAACTTCAAAA 302296 Query 112507 AACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATT 112566 || | || ||| || | ||| ||| || || |||||||||| |||||| | |||| Sbjct 302297 AATTACATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAATT 302356 Query 112567 TTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTG 112626 ||||| ||||| || | ||||| ||||||||||| | ||||||| | | |||| Sbjct 302357 ACTACCCTGTTGAAGAAGCGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTG 302416 Query 112627 TCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGA 112686 | ||||||||||| || ||||| || | || |||||||||| || ||||| Sbjct 302417 TTCAAGGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCC 302476 Query 112687 AGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGG 112746 | ||| | || |||||||| || ||||| ||| | | || || || | Sbjct 302477 GTTTGCTAAATATCCAAATCTTTGAGACTATTTATCATGCCTCCATGGAAGCTTCTTGTG 302536 Query 112747 AGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGG 112806 | | || || || |||||||| ||||| || | || ||||| ||||| ||||| Sbjct 302537 AACTAGCTCAGAAGGACGGTCCATACGAAACTTTCCAAGGATCTCCTGCTTCTCAAGGTA 302596 Query 112807 TGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA-CTACGACTGGGACGCTCTC 112865 | || || ||||||||||||| | | ||| | || | || |||||| | || Sbjct 302597 TACTACAGTTTGATATGTGGG-ACCAAAAACCCTACGGCATGTGGGATTGGGACAC-CTT 302654 Query 112866 AAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCA 112922 ||| || | |||| | || | ||| || | | | || || |||||||||||||| Sbjct 302655 AAGAAAAGATATCATGAAGCATGGTATTAG--AAATTCCTTGACCATGGCACCAATGCCT 302712 Query 112923 ACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 112969 || || ||||| | ||||| |||||| |||||||||| || ||||| Sbjct 302713 ACTGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTCGAACC 302759 >seq9 Length=426033 Score = 129 bits (142), Expect = 7e-25 Identities = 908/1432 (63%), Gaps = 64/1432 (4%) Strand=Plus/Minus Query 111576 TACCTCCAAAGACTGGATGGTGTCTTGATGGAAACCCCACAGTACATGTTCATGCGGGTC 111635 ||| | | ||||||| | |||| || ||| || ||| | || | ||||| || Sbjct 236710 TACTTGCTAAGACTGAACGGTGAAGTGGCAGAACGTCCTCAGCATTTGGTAATGCGTGTG 236651 Query 111636 GCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGACAAGATGTCC 111695 ||| | ||||||||||| ||||| || ||||| || |||| || | |||||| Sbjct 236650 GCGCTAGGTATCCATGGTAGCGATATCGAATCTGTGCTGAAGACTTATAATTTGATGTC- 236592 Query 111696 CGT---GGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCC 111752 || | || |||| ||||| | ||||| | |||||||||||||| ||| || Sbjct 236591 -GTTAAGATAC-TTCACTCACGCTTCCCCAACTTTATTCAACGCTGGTACGCCACATCCT 236534 Query 111753 CAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGC 111812 |||||||| |||||| | ||||| | ||||| || || ||| | || ||||| | Sbjct 236533 CAAATGTCTTCATGTTTCTTAATTGCCATGAAGGATGACTCTATCGAAGGTATTTATGAT 236474 Query 111813 ACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCAT 111872 ||| | | |||||||| || || || || |||||| | || | || ||| | Sbjct 236473 ACTTTGAAAGAATGTGCTATGATTTCCAAAACTGCAGGTGGTGTTGGTCTTCATATCAAC 236414 Query 111873 GATGTCAGAGCCAACAAG-TCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTAT 111931 | || | || ||| | ||| ||| ||||| || ||| ||| | || | || Sbjct 236413 AACATCCGTTCC-ACAGGTTCTTATATCGCTGGTACCAACGGTACTTCAAACGGGTTGAT 236355 Query 111932 TCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCGCAA 111991 ||| ||| |||| || || || || || || ||||| |||| | || || ||| Sbjct 236354 TCCTATGATTCGTGTTTTCAATAATACTGCCCGTTATGTGGACCAGGGTG---GTAACAA 236298 Query 111992 GGGATCTATCGCAGTC-----TATCTT-GAGCCATGGCACGCGGATATCATGGAGTTCCT 112045 | || || || || | |||| ||||||||||| || |||||| | || || | Sbjct 236297 GAGACCTGGTGCTTTCGCCCTTTTCTTGGAGCCATGGCATGCAGATATCTTCGACTTTGT 236238 Query 112046 TGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTC 112104 || | | | || ||| | || || | |||| | ||| | ||| | |||| Sbjct 236237 CGATATCAGAAAAACACATGGTAAGGAAGAAATTC-GTGCAAGAGATTTGTTCCCTGCTC 236179 Query 112105 TCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTT 112164 | ||||| || ||||| |||||||| | ||| | ||| ||| |||| || | |||| Sbjct 236178 TATGGATCCCTGATCTTTTCATGAAACGTGTTCAAGAGGATGGGCCTTGGACTTTATTTT 236119 Query 112165 GTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACA 112224 || || || ||| | |||| |||||| || ||||||| || || | Sbjct 236118 CACCCAGTGCTGCCCCAGGTTTAGATGATGTGTGGGGTGATGAATTTGAAGAACTATATA 236059 Query 112225 CAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAG 112284 | ||||| |||| |||| | | || | ||| | ||||| | | Sbjct 236058 CTCGTTACGAAAGAGAAGGTCGTG---GTAAAACAATTAAAGCCCAAAAGTTGTGGTATG 236002 Query 112285 CTATTCT-CAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGT 112343 | ||| | |||| | || || || || |||||||| | ||| |||| || ||||| ||| Sbjct 236001 CCATTTTGCAAG-CACAGACAGAAACAGGTACACCTTTCATGGTTTATAAGGACGCATGT 235943 Query 112344 AACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAA 112403 ||| |||| || ||| |||| || ||| ||||| || ||| | ||| ||| Sbjct 235942 AACAGGAAGACAAACCAACAGAACTTAGGTACTATCAAATCATCTAACTTATGTTGTGAA 235883 Query 112404 ATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTC 112463 ||| | |||| | | | ||||| || || || ||||| | || || || || || Sbjct 235882 ATCGTCGAATATTCCTCCCCGGATGAAACTGCAGTTTGTAATTTAGCTTCTATTGCCCTA 235823 Query 112464 CC--CA--AGTATGTGGATCCAGA----GACAAA-----GACATTTGATTATGAAAAACT 112510 || || || || || | |||| | ||| | | | ||| || | | | Sbjct 235822 CCAGCATTCGT-TGAGGTTTCAGAAGATGGTAAAACTGCAAGCTATAATTTCGAGAGATT 235764 Query 112511 CCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTA 112570 ||||| || | ||| | || | ||| | ||||||||||| || | |||| || Sbjct 235763 GCACGAGATTGCTAAAGTCATTACTCACAACTTGAACAGAGTTATCGACCGTAATTACTA 235704 Query 112571 CCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGT 112627 || ||| ||| ||| | || || ||||||| || | || |||| ||| ||||| Sbjct 235703 TCCAGTTCCCGAG---GCTAGAAATTCAAATATGAAGCATAGACCTATTGCTCTTGGTGT 235647 Query 112628 CCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAA 112687 ||| || | || ||| | || | | || | | ||||| || || ||||| | Sbjct 235646 CCAGGGCTTGGCCGATACTTATATGATGTTGCGTCTACCCTTTGAATCGGAAGAAGCTCA 235587 Query 112688 GGAAATC--AATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCG 112745 || || || | || || || || || || || || ||||||| || | Sbjct 235586 --AACTCTAAACAAACAAATCTTCGAAACTATTTACCATGCTACTCTTGAAGCCTCCTGT 235529 Query 112746 GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG 112805 || ||||| | || ||| |||| || ||||| |||||||||||||| |||||| Sbjct 235528 GAATTGGCCCAAAAAGAAGGTAAATATTCTACTTTTGAAGGTTCTCCAGCTTC-CAAGGG 235470 Query 112806 -GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA-CTACGACTGGGACGCTC 112863 | | ||||| ||||||| |||| | | |||| || | || ||||| | | Sbjct 235469 TATTTTACAATTCGATATGT-GGAACGCTAAACCATTTGGCATGTGGGATTGGGAAAC-C 235412 Query 112864 TCAAGGAACG-CA---TCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAA 112917 | ||| || | || | || | | |||| | | ||| ||||| |||||||||| Sbjct 235411 TTAAGAAAGGACATTGTTAA--ACATGGGT-TAAGAAAC--TCTTTGACTATGGCACCAA 235357 Query 112918 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 112969 ||||||| ||||| || | ||||| | ||| |||||||||| || ||||| Sbjct 235356 TGCCAACCGCCTCAACTTCCCAAATTCTTGGTTATAATGAATGTTTCGAACC 235305 >seq2 Length=802397 Score = 91.5 bits (100), Expect = 2e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 163546 CTATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGC 163605 ||| || ||| |||||||| | || || || || |||||| ||||||||||| ||||| Sbjct 711926 CTACGGTCGTATTGCGCCAAGGTCAGGCCTGGCAGTGAAAAACGGTATCCAAACCGGTGC 711985 Query 163606 GGGTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCAT 163660 |||||| | || || ||||| |||||||| ||||| ||| | ||||||||| Sbjct 711986 TGGTGTTGTCGACAGAGATTACACCGGTGAAGTTAAAGTAGTTTTATTCAATCAT 712040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620739808400480