Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739595.1_202016-09-
21] 334 sequences; 12,113,438 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq333 102 6e-17
>seq333
Length=761
Score = 102 bits (112), Expect = 6e-17
Identities = 164/233 (70%), Gaps = 12/233 (5%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||||||||| || |||||||| || ||||| ||| || | || || ||| ||
Sbjct 25 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 84
Query 27850 GACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| | | |||| |||||| ||||| ||||| |||||| |||| || |
Sbjct 85 GACACTATTGACAAC--GTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATC 142
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGAC----GAACGCAGCTTGTCCGAT 27963
| ||| | || ||||||||||| || ||| |||| ||| |||||| |||| |||
Sbjct 143 AACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGC----TGTCTGAT 198
Query 27964 TACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|| ||||| || |||||| || ||||||||||| ||| | ||| | || ||
Sbjct 199 TATAACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 251
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||||||||| || |||||||| || ||||| ||| || | || || ||| ||
Sbjct 253 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 312
Query 27850 GACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || | |||| |||||| || || || ||||||||| | || ||| |
Sbjct 313 GACAATATTGACAAC--GTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATC 370
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| || | || |||||||| || || ||| | || || | | | |||||| || ||||
Sbjct 371 AACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACA 430
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||| || ||| | || ||||| ||| | ||| | || ||
Sbjct 431 ACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355860951417618
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |