Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739625.1_202016-09- 21] 542 sequences; 12,326,305 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq12 156 4e-33 seq9 114 1e-20 seq11 100 3e-16 >seq12 Length=1057075 Score = 156 bits (172), Expect = 4e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || |||||| | ||| || || ||||||||||| ||||||||||| | | Sbjct 61717 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 61776 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || || || || || ||||||||||| | ||| ||||| || || Sbjct 61777 AAGGTTCTACCA-TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 61835 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| |||||||| || |||||| ||| | |||||||| ||||| || Sbjct 61836 GATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 61895 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || |||| |||||| |||||||||||||| Sbjct 61896 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 61943 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || |||||| | ||| || || ||||||||||| ||||||||||| | | Sbjct 62173 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 62232 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || ||| | ||| || ||||| || || ||||| ||||| | ||| ||||| || || Sbjct 62233 AA-GGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGG 62291 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || || || ||||| || || || | |||||||| ||||| || Sbjct 62292 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 62351 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| |||||||||||||| ||||| ||||| || || ||||| Sbjct 62352 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 62399 Score = 136 bits (150), Expect = 4e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545 || ||||| | || ||| || | |||||| || ||||||||||| |||||||||||| | Sbjct 496326 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 496267 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || | || || || ||||| ||||| | || || || || || Sbjct 496266 AAAGTTCTACCA-TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 496208 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||| || || ||||| ||| | ||||| || ||||| || Sbjct 496207 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 496148 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || ||||| || |||||||||||||| || |||||||||||||| ||| Sbjct 496147 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 496096 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || |||||| | || | ||| || || || |||||||| || || | | Sbjct 61945 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 62004 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | || | | | ||| || || || || || ||||||||||| | || ||||| || || Sbjct 62005 AGCGTTCT-ACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 62063 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||||||||| |||||| ||| | |||||||| ||||| || Sbjct 62064 AATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 62123 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || |||| |||||| |||||||||||||| Sbjct 62124 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 62171 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| || | | ||| || |||| ||||| ||||| ||||||||||| || | | Sbjct 62401 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 62460 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | || | | | ||| || ||||| || || ||||| ||||| | || ||||| || || Sbjct 62461 AGCGTTCT-ACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 62519 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||||||||| || || ||| | || ||||| ||||| || Sbjct 62520 GATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 62579 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || |||||||||||||| ||||| || |||||||| ||||| Sbjct 62580 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 62627 Score = 118 bits (130), Expect = 1e-21 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 134501 CAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGT 134559 ||| || ||||| || ||||| ||||||||||| |||||||| | || || | | | | Sbjct 61503 CAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA-T 61561 Query 134560 CGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTT 134619 | || || || || || ||||||||||| | ||||| || || || || ||||| || | Sbjct 61562 CTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGT 61621 Query 134620 CTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGG 134679 |||||||||| || || ||| | ||||| || ||||| || || || || || | Sbjct 61622 CTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAG 61681 Query 134680 TTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| || | || || || ||||||||||| Sbjct 61682 TCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 61715 >seq9 Length=439600 Score = 114 bits (126), Expect = 1e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || ||| || | ||| | |||||||| ||||||||||||||||| | | Sbjct 73012 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 72953 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || ||| | ||| || | || || || ||||| ||||| | || || || || || Sbjct 72952 AA-GGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 72894 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || |||||||| ||| ||||| ||| | ||||| || ||||| || Sbjct 72893 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 72834 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705 || | ||| ||||| ||||| || ||||| || || ||| Sbjct 72833 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 72794 >seq11 Length=647038 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || ||| || | |||| |||||||| ||||| ||||||||||| Sbjct 619740 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCTTTTTGGATGTTGTAGTCAGAT 619799 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || | || || || ||||| ||||| | || || || || || Sbjct 619800 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 619859 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| || || ||||| ||| | ||||| || ||||| || Sbjct 619860 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 619919 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAA 134704 || | ||| ||||| ||||| || ||||| |||||||| Sbjct 619920 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 619957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505394975925840