Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739665.1_202016-09- 21] 317 sequences; 12,021,606 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq2 132 6e-26 seq15 114 2e-20 >seq2 Length=808903 Score = 132 bits (146), Expect = 6e-26 Identities = 388/589 (66%), Gaps = 28/589 (5%) Strand=Plus/Minus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457 || |||||||| |||| || ||||| | ||| ||| ||| || ||||||||| || Sbjct 393702 AAGTTTGAAGATTTGGGTGTCGGTGGTTTGGATAAAGAGTTTACTAAAATTTTCAGAAGA 393643 Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517 || ||||| | || ||||| | | ||| ||||| | || | ||| | Sbjct 393642 GCGTTTGCAAGTCGAATCTTTCCTCCTTCAGTTATAGAAAAACTGGGTATTTCTCATGTT 393583 Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577 ||||| | |||| | || ||||| ||| ||||| || ||||| || || ||| Sbjct 393582 AAAGGTTTGCTATTGTACGGTCCTCCAGGTACTGGTAAGACCTTAATTGCAAGAAAGATT 393523 Query 164578 GCT-CAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGA 164632 | | ||| | | ||| || || || ||||| || |||||||| ||| | |||| Sbjct 393522 GGTACAA--TGCTGAAT-GCTAAAGAGCCC--AAAATCGTCAATGGTCCAGAAATTTTGA 393468 Query 164633 ACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAG 164692 ||| || || ||| ||||||| || || | || || ||| |||| || |||| || Sbjct 393467 GCAAGTACGTTGGTTCTTCAGAAGAAAACATTCGTAATTTATTTAAGGATGCAGAAGCAG 393408 Query 164693 AACAAAAGAAAGC--AGGTTTAGCTAG-TAAATTACATGTTATTGTTTTTGATGAGATAG 164749 || | | | || ||| | || | | |||||| ||||| |||| |||||| | | Sbjct 393407 AATATAGG---GCTAAGGGTGAGGAATCTTCCTTACATATTATTATTTTCGATGAGCTGG 393351 Query 164750 ATGCTCTTTGCAAAAAACGTGGT------GATAATATTATTCATGATG----CAGTG--G 164797 || || ||| ||| | | ||| | | || || | || | || || | Sbjct 393350 ATTCTGTTTTCAAGCAGAGAGGTTCAAGAGGTGATGGTACTGGTGTAGGGGACAATGTAG 393291 Query 164798 TTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAG 164857 ||||||| ||| | ||||||| |||||||| || || ||||||||||| || | | Sbjct 393290 TTAATCAATTGTTAGCTAAAATGGATGGTGTTGATCAGTTGAATAATATTTTGGTTATTG 393231 Query 164858 GTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAAT 164917 |||||||||| || |||||||| || |||| | || || || ||| |||| ||| Sbjct 393230 GTATGACCAATCGTAAAGATTTAATAGACAGTGCTCTTTTGCGTCCAGGTAGATTTGAAG 393171 Query 164918 TGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTT 164966 | || | ||||| |||||||| || ||||| | || |||||||| Sbjct 393170 TCCAAGTTGAAATTCATTTACCCGATGAAAAAGGAAGACTCCAAATTTT 393122 >seq15 Length=1062377 Score = 114 bits (126), Expect = 2e-20 Identities = 123/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 19341 TAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAG 19400 ||||| || | || || ||| |||| ||||| || ||||||||| | | |||||| | Sbjct 594659 TAAGAACTACAAAGATTCCTCAAATTGGTGACAAATTTGCTTCTCGTCACGGTCAAAAGG 594600 Query 19401 GCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGC 19460 | || |||||| | |||||| |||||||||||| ||||| ||| ||||| || | Sbjct 594599 GTACTATTGGTATCACATATCGTAGAGAAGATATGCCATTTACCGCAGAAGGTATTGTTC 594540 Query 19461 CGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503 | ||| | ||||||||||| |||||| ||||| ||| ||||| Sbjct 594539 CAGATTTGATTATTAACCCTCATGCTATTCCATCTCGTATGAC 594497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595869638857200