Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739665.1_202016-09- 21] 317 sequences; 12,021,606 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5 266 4e-66 seq9 129 7e-25 seq2 91.5 2e-13 >seq5 Length=564347 Score = 266 bits (294), Expect = 4e-66 Identities = 890/1367 (65%), Gaps = 36/1367 (3%) Strand=Plus/Plus Query 111627 ATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGAC 111686 ||| | ||||| | || ||||| || |||||| || ||| ||| || || || || Sbjct 298634 ATGAGAGTCGCACTAGGCATCCACGGTAGAGATATCGAGGCTGCTTTAGAAACGTATAAC 298693 Query 111687 AAGATGTCCCGTGG-TATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACC 111745 |||||| | ||| || || |||| | ||||| | ||||| || ||||| || Sbjct 298694 TTGATGTCTCTAAAATATTTTACTC-ACGCCTCTCCAACGTTGTTCAATGCCGGTACTCC 298752 Query 111746 AAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCAT 111805 || ||| ||||||||| ||||||| | |||| | |||||||| || ||| | || || Sbjct 298753 AAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGAT 298812 Query 111806 TTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCA 111865 ||||| ||| | | |||||||| || || || ||||||||||| || | || Sbjct 298813 TTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACA 298872 Query 111866 CATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGTACAAATGGTCAATCAGATG 111924 |||||| | | | | ||| || || ||| |||||||| ||| || | | Sbjct 298873 TATCCATAACATTCGTTC-AACTGGTTCTTACATTGCTGGTACAAACGGTACTTCTAACG 298931 Query 111925 GTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGC 111984 || | ||||| ||| |||| || || || ||| || || ||||| |||| | ||| Sbjct 298932 GTTTAATTCCTATGATTCGTGTTTTCAATAACACTGCCCGTTATGTTGACCAGGGTGGTA 298991 Query 111985 GTCGCAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAG 112040 | ||| || | | || | || || || |||||||| || ||||| | || Sbjct 298992 ATAA-AAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATATTTGAT 299050 Query 112041 TTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCC-GCGATCTCTTCTC 112099 || |||| | | ||||| ||| | ||||| || ||| | ||| | ||| | Sbjct 299051 TTTATTGATATTAGGAAGAACCACGGTAAAGAGGAAATTCG-TGCAAGAGATTTGTTCCC 299109 Query 112100 CGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCT 112159 ||||| |||||||| ||||| ||||||||| | || || || | ||| | ||| | | Sbjct 299110 TGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATT 299169 Query 112160 CTTTTGTCCAGACAAG-GCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCC 112218 || | |||| ||| || || ||| | |||| ||||| |||||||| || | Sbjct 299170 ATTCTCTCCA-ACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTC 299228 Query 112219 TCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGT 112278 | || || |||||| ||||| |||| | | ||| | ||| | | | Sbjct 299229 TATATACCCGCTACGAGAAAGAAGGTCGTGGTAA---GACTATCAAAGCCCAAAAATTAT 299285 Query 112279 GGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACG 112338 || | | ||| | | ||||||| || ||||||||||| | | ||||||| || | Sbjct 299286 GGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATG 299345 Query 112339 CCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTA 112398 | |||||| ||| ||||||||| || || ||||| |||||| || ||| | || Sbjct 299346 CTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCAAACTTATGCT 299405 Query 112399 CAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCG 112458 ||||| | |||| ||| |||||| || ||||| |||||| | || || | | Sbjct 299406 GTGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTG 299465 Query 112459 CTCTCCCC------------AAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 112506 | | || | | || |||| |||| |||| | | ||| Sbjct 299466 CCTTACCAGCATTCATTGAAACTTCTGAGGATGGTAAGACTTCCACATACAACTTCAAAA 299525 Query 112507 AACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATT 112566 || | || ||| || | ||| ||| || || |||||||||| |||||| | |||| Sbjct 299526 AATTACATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAATT 299585 Query 112567 TTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTG 112626 ||||| ||||| || | ||||| ||||||||||| | ||||||| | | |||| Sbjct 299586 ACTACCCTGTTGAAGAAGCGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTG 299645 Query 112627 TCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGA 112686 | ||||||||||| || ||||| || | || |||||||||| || ||||| Sbjct 299646 TTCAAGGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCC 299705 Query 112687 AGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGG 112746 | ||| | || |||||||| || ||||| ||| | | || || || | Sbjct 299706 GTTTGCTAAATATCCAAATCTTTGAGACTATTTATCATGCCTCCATGGAAGCTTCTTGTG 299765 Query 112747 AGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGG 112806 | | || || || |||||||| ||||| || | || ||||| ||||| ||||| Sbjct 299766 AACTAGCTCAGAAGGACGGTCCATACGAAACTTTCCAAGGATCTCCTGCTTCTCAAGGTA 299825 Query 112807 TGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA-CTACGACTGGGACGCTCTC 112865 | || || ||||||||||||| | | ||| | || | || |||||| | || Sbjct 299826 TACTACAGTTTGATATGTGGG-ACCAAAAACCCTACGGCATGTGGGATTGGGACAC-CTT 299883 Query 112866 AAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCA 112922 ||| || | |||| | || | ||| || | | | || || |||||||||||||| Sbjct 299884 AAGAAAAGATATCATGAAGCATGGTATTAG--AAATTCCTTGACCATGGCACCAATGCCT 299941 Query 112923 ACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 112969 || || ||||| | ||||| |||||| |||||||||| || ||||| Sbjct 299942 ACTGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTCGAACC 299988 >seq9 Length=433385 Score = 129 bits (142), Expect = 7e-25 Identities = 908/1432 (63%), Gaps = 64/1432 (4%) Strand=Plus/Minus Query 111576 TACCTCCAAAGACTGGATGGTGTCTTGATGGAAACCCCACAGTACATGTTCATGCGGGTC 111635 ||| | | ||||||| | |||| || ||| || ||| | || | ||||| || Sbjct 239977 TACTTGCTAAGACTGAACGGTGAAGTGGCAGAACGTCCTCAGCATTTGGTAATGCGTGTG 239918 Query 111636 GCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGACAAGATGTCC 111695 ||| | ||||||||||| ||||| || ||||| || |||| || | |||||| Sbjct 239917 GCGCTAGGTATCCATGGTAGCGATATCGAATCTGTGCTGAAGACTTATAATTTGATGTC- 239859 Query 111696 CGT---GGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCC 111752 || | || |||| ||||| | ||||| | |||||||||||||| ||| || Sbjct 239858 -GTTAAGATAC-TTCACTCACGCTTCCCCAACTTTATTCAACGCTGGTACGCCACATCCT 239801 Query 111753 CAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGC 111812 |||||||| |||||| | ||||| | ||||| || || ||| | || ||||| | Sbjct 239800 CAAATGTCTTCATGTTTCTTAATTGCCATGAAGGATGACTCTATCGAAGGTATTTATGAT 239741 Query 111813 ACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCAT 111872 ||| | | |||||||| || || || || |||||| | || | || ||| | Sbjct 239740 ACTTTGAAAGAATGTGCTATGATTTCCAAAACTGCAGGTGGTGTTGGTCTTCATATCAAC 239681 Query 111873 GATGTCAGAGCCAACAAG-TCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTAT 111931 | || | || ||| | ||| ||| ||||| || ||| ||| | || | || Sbjct 239680 AACATCCGTTCC-ACAGGTTCTTATATCGCTGGTACCAACGGTACTTCAAACGGGTTGAT 239622 Query 111932 TCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCGCAA 111991 ||| ||| |||| || || || || || || ||||| |||| | || || ||| Sbjct 239621 TCCTATGATTCGTGTTTTCAATAATACTGCCCGTTATGTGGACCAGGGTG---GTAACAA 239565 Query 111992 GGGATCTATCGCAGTC-----TATCTT-GAGCCATGGCACGCGGATATCATGGAGTTCCT 112045 | || || || || | |||| ||||||||||| || |||||| | || || | Sbjct 239564 GAGACCTGGTGCTTTCGCCCTTTTCTTGGAGCCATGGCATGCAGATATCTTCGACTTTGT 239505 Query 112046 TGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTC 112104 || | | | || ||| | || || | |||| | ||| | ||| | |||| Sbjct 239504 CGATATCAGAAAAACACATGGTAAGGAAGAAATTC-GTGCAAGAGATTTGTTCCCTGCTC 239446 Query 112105 TCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTT 112164 | ||||| || ||||| |||||||| | ||| | ||| ||| |||| || | |||| Sbjct 239445 TATGGATCCCTGATCTTTTCATGAAACGTGTTCAAGAGGATGGGCCTTGGACTTTATTTT 239386 Query 112165 GTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACA 112224 || || || ||| | |||| |||||| || ||||||| || || | Sbjct 239385 CACCCAGTGCTGCCCCAGGTTTAGATGATGTGTGGGGTGATGAATTTGAAGAACTATATA 239326 Query 112225 CAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAG 112284 | ||||| |||| |||| | | || | ||| | ||||| | | Sbjct 239325 CTCGTTACGAAAGAGAAGGTCGTG---GTAAAACAATTAAAGCCCAAAAGTTGTGGTATG 239269 Query 112285 CTATTCT-CAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGT 112343 | ||| | |||| | || || || || |||||||| | ||| |||| || ||||| ||| Sbjct 239268 CCATTTTGCAAG-CACAGACAGAAACAGGTACACCTTTCATGGTTTATAAGGACGCATGT 239210 Query 112344 AACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAA 112403 ||| |||| || ||| |||| || ||| ||||| || ||| | ||| ||| Sbjct 239209 AACAGGAAGACAAACCAACAGAACTTAGGTACTATCAAATCATCTAACTTATGTTGTGAA 239150 Query 112404 ATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTC 112463 ||| | |||| | | | ||||| || || || ||||| | || || || || || Sbjct 239149 ATCGTCGAATATTCCTCCCCGGATGAAACTGCAGTTTGTAATTTAGCTTCTATTGCCCTA 239090 Query 112464 CC--CA--AGTATGTGGATCCAGA----GACAAA-----GACATTTGATTATGAAAAACT 112510 || || || || || | |||| | ||| | | | ||| || | | | Sbjct 239089 CCAGCATTCGT-TGAGGTTTCAGAAGATGGTAAAACTGCAAGCTATAATTTCGAGAGATT 239031 Query 112511 CCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTA 112570 ||||| || | ||| | || | ||| | ||||||||||| || | |||| || Sbjct 239030 GCACGAGATTGCTAAAGTCATTACTCACAACTTGAACAGAGTTATCGACCGTAATTACTA 238971 Query 112571 CCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGT 112627 || ||| ||| ||| | || || ||||||| || | || |||| ||| ||||| Sbjct 238970 TCCAGTTCCCGAG---GCTAGAAATTCAAATATGAAGCATAGACCTATTGCTCTTGGTGT 238914 Query 112628 CCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAA 112687 ||| || | || ||| | || | | || | | ||||| || || ||||| | Sbjct 238913 CCAGGGCTTGGCCGATACTTATATGATGTTGCGTCTACCCTTTGAATCGGAAGAAGCTCA 238854 Query 112688 GGAAATC--AATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCG 112745 || || || | || || || || || || || || ||||||| || | Sbjct 238853 --AACTCTAAACAAACAAATCTTCGAAACTATTTACCATGCTACTCTTGAAGCCTCCTGT 238796 Query 112746 GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG 112805 || ||||| | || ||| |||| || ||||| |||||||||||||| |||||| Sbjct 238795 GAATTGGCCCAAAAAGAAGGTAAATATTCTACTTTTGAAGGTTCTCCAGCTTC-CAAGGG 238737 Query 112806 -GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA-CTACGACTGGGACGCTC 112863 | | ||||| ||||||| |||| | | |||| || | || ||||| | | Sbjct 238736 TATTTTACAATTCGATATGT-GGAACGCTAAACCATTTGGCATGTGGGATTGGGAAAC-C 238679 Query 112864 TCAAGGAACG-CA---TCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAA 112917 | ||| || | || | || | | |||| | | ||| ||||| |||||||||| Sbjct 238678 TTAAGAAAGGACATTGTTAA--ACATGGGT-TAAGAAAC--TCTTTGACTATGGCACCAA 238624 Query 112918 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 112969 ||||||| ||||| || | ||||| | ||| |||||||||| || ||||| Sbjct 238623 TGCCAACCGCCTCAACTTCCCAAATTCTTGGTTATAATGAATGTTTCGAACC 238572 >seq2 Length=808903 Score = 91.5 bits (100), Expect = 2e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 163546 CTATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGC 163605 ||| || ||| |||||||| | || || || || |||||| ||||||||||| ||||| Sbjct 717540 CTACGGTCGTATTGCGCCAAGGTCAGGCCTGGCAGTGAAAAACGGTATCCAAACCGGTGC 717599 Query 163606 GGGTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCAT 163660 |||||| | || || ||||| |||||||| ||||| ||| | ||||||||| Sbjct 717600 TGGTGTTGTCGACAGAGATTACACCGGTGAAGTTAAAGTAGTTTTATTCAATCAT 717654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620739940308240