Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739695.1_202016-09- 21] 331 sequences; 12,027,423 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq12 105 7e-18 seq9 91.5 1e-13 >seq12 Length=1035937 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| || | ||| || || |||| |||||||| || || ||||||||||| | Sbjct 61928 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGAC 61987 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || || |||||| || || ||||| ||| |||||| | ||| ||||| ||||| Sbjct 61988 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 62047 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| ||||| || | | || | |||||| | || ||| || Sbjct 62048 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 62107 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | ||| | || || |||||||| || || || || || |||||| Sbjct 62108 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCATA 62155 Score = 82.4 bits (90), Expect = 8e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || || || || || ||||||||||| || || || |||||| || || ||||| Sbjct 62186 GTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCG 62245 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| |||||| | ||| ||||| ||||| || ||||| ||||| |||||| || Sbjct 62246 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTA 62305 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | || || | | ||| ||||| | || | || || |||||||| || Sbjct 62306 ACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTC 62365 Query 143168 TTTACGAATATTTGCATA 143185 || ||||| || |||||| Sbjct 62366 TTGACGAAAATCTGCATA 62383 >seq9 Length=421214 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| || | ||| ||||| || | || ||||||||||| |||||||| || | Sbjct 72819 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 72760 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || || |||||| | ||| ||||||||| |||||| | ||| || || || || Sbjct 72759 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 72700 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| ||| ||| || | | || | ||||| | | ||| ||| Sbjct 72699 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 72640 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAA 143175 || | ||| | ||||| || ||||| || || || || Sbjct 72639 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 72602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507012302227920