Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739705.1_202016-09-
21] 178 sequences; 11,992,971 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq12 125 1e-23
seq9 114 2e-20
seq11 113 7e-20
seq15 109 8e-19
>seq12
Length=1104363
Score = 125 bits (138), Expect = 1e-23
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| | |||||||| ||||| || |||||||| ||||| ||||| | |
Sbjct 62951 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 62892
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| || | || |||||||||||| || |||||||| || || || ||
Sbjct 62891 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 62832
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | |||||||| || || ||| |||| ||| || |||| | || || |||
Sbjct 62831 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 62772
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTA 124767
|||||||| || || ||| | || | || || | || | |||||||
Sbjct 62771 ATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGTA 62723
Score = 116 bits (128), Expect = 6e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 124565 AGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAATTTAAAACAGAA 124624
||| || |||||||| ||||| ||||| | || || ||| || | ||| ||
Sbjct 63153 AGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAACGTCAAAAGTAA 63094
Query 124625 AATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACA 124684
|||||||||||||||||||| || || |||||||| || | |||||||| || || ||
Sbjct 63093 GATTCAAGATAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATTTTTGCTGGTAAGCA 63034
Query 124685 ATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTT 124744
| |||| ||| || |||| || || || || || ||||| ||||| ||| | || ||
Sbjct 63033 ACTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCTACTCTTCACTT 62974
Query 124745 GGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
||| || | || |||||||||| ||| ||
Sbjct 62973 GGTGTTGAGATTGAGAGGTGGTATGCAAATTT 62942
Score = 91.5 bits (100), Expect = 2e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || | ||||| | || || ||||| ||||| | || ||||| |
Sbjct 63862 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 63803
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || || | || |||||||||||| || |||||||| || || ||||||
Sbjct 63802 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 63743
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | || ||||| || || || |||| || || |||| | ||||| ||
Sbjct 63742 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 63683
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| || || || || || ||| | || || | || ||||||||||
Sbjct 63682 ATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTAT 63633
>seq9
Length=434945
Score = 114 bits (126), Expect = 2e-20
Identities = 158/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 124548 TTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATT 124607
||| | ||||| | || || || || || ||| | || ||||| | ||| || |||
Sbjct 69843 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 69902
Query 124608 TCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTT 124667
||| | || || |||||||| || |||||||| |||||||| |||||||| |
Sbjct 69903 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 69962
Query 124668 ATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAA 124727
|| ||||| || || ||||| || || || |||| || || || || |||||||||
Sbjct 69963 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 70022
Query 124728 GAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| |||||||| || || || | || ||||||||||
Sbjct 70023 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTAT 70063
>seq11
Length=645416
Score = 113 bits (124), Expect = 7e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 124554 AAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAAT 124613
||||| | || || || || || ||| | || ||||| | ||| || ||| |||
Sbjct 618520 AAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACAAT 618461
Query 124614 TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTT 124673
| || || || ||||| || |||||||| |||||||| |||||||| | || |||
Sbjct 618460 GTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTT 618401
Query 124674 GCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCA 124733
|| || || ||||| || || || |||| || || || || || |||||||||||
Sbjct 618400 GCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAAGAATCC 618341
Query 124734 ACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| |||||||| || | ||| ||||||||||
Sbjct 618340 ACTTTACATTTGGTCTTGAGATTAAGAGGTGGTAT 618306
>seq15
Length=1028342
Score = 109 bits (120), Expect = 8e-19
Identities = 358/556 (64%), Gaps = 28/556 (5%)
Strand=Plus/Plus
Query 205318 CtttttatttttaattttGGAAATGGGTTTGGTGTACGTTCTAATTGtttttttAATCCA 205377
||||| || |||| ||| || ||||| |||| | | | ||||| ||| || ||
Sbjct 456629 CTTTTAATCTTTAGTTTCGGGAATGGTCTTGGATTTCTGGAGATTTGTTCTTTCAAGGCA 456688
Query 205378 TTAATATGATTAACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTTTT 205437
| ||| || | ||| | |||||||| || | | ||||||| || ||| ||| |
Sbjct 456689 TCAATGTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACTCACCTGGCTCC 456748
Query 205438 AAATTAGTTAAATGT-GCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGG 205496
| | | || | | |||||||| |||||| ||| ||| |||| ||||| ||
Sbjct 456749 ATGTC-GACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAATGTTAAACGG 456807
Query 205497 TACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAG------------ 205544
||| || || ||||||||| || | ||| |||| | |||| |||
Sbjct 456808 TACTCCCAACCCCATATCACAAGAACGTTGGTACAATAAGCATGAAAGGCGGGGCTTACC 456867
Query 205545 --ATATTTATTATTAATT----------ACATGAAATTGTACAAAACAATGACAAGGTGG 205592
|| || | || || |||| || ||| |||| ||| || |||||
Sbjct 456868 GGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAAATATGGCATGGTGG 456927
Query 205593 TATAACCATATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTC 205652
| | |||| || |||| ||| || |||||||| | | || || ||||| |
Sbjct 456928 CAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATGATTCTTCTATCGTA 456987
Query 205653 AGGtttattttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATA 205712
|| || | || | ||||| |||| ||| | |||||||||| ||||| |||||
Sbjct 456988 GGGATTTGTCTTAAGTTTATGAATAACCTGTTTCAATTGATCAATACCTTGTCCAGTATA 457047
Query 205713 ATTTGTATC-CATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTG 205771
| ||| || || | ||||||||||||||||| | ||||||||| |||||||| |
Sbjct 457048 GTCGTCATCGCACGTCT-TGTATTTAGCACCAAAATGCCTCCATTGAAATCCATAAACGG 457106
Query 205772 GACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttATATATTTTAATGATC 205831
| || | ||| ||| |||| ||||| || || || || | || ||||| ||||
Sbjct 457107 GCCCCAGATCTCCTACTTTCCTATCTTTGAACCCCATCTTATCTAAATATTCACGAGATC 457166
Query 205832 CATTTTCATCCCAAAT 205847
|||| | ||||||||
Sbjct 457167 CATTACCGTCCCAAAT 457182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755454319110400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |