Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739705.1_202016-09-
21] 178 sequences; 11,992,971 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq5 327 1e-84
>seq5
Length=561051
Score = 327 bits (362), Expect = 1e-84
Identities = 917/1391 (66%), Gaps = 46/1391 (3%)
Strand=Plus/Plus
Query 75227 ATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGAC 75286
||| | |||||| | ||||||||||| ||| || || ||| || || || || ||
Sbjct 296996 ATGAGAGTCGCACTAGGCATCCACGGTAGAGATATCGAGGCTGCTTTAGAAACGTATAAC 297055
Query 75287 AAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACC 75345
|||||| | || ||| || | |||||| | ||||| | |||||||| ||||| ||
Sbjct 297056 TTGATGTCTCTAAAATATTTT-ACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCC 297114
Query 75346 AAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTAT 75405
|| ||| || |||||| ||| ||| | | |||| ||||||||||| ||| | || ||
Sbjct 297115 AAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGAT 297174
Query 75406 CTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCA 75465
|| | || | | ||| ||||| || || || ||||| |||||||| | ||
Sbjct 297175 TTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACA 297234
Query 75466 CATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGG 75525
|||||| | | | | | | ||| ||| || ||||| ||| || | ||
Sbjct 297235 TATCCATAACATTCGTTCAACTGGTTCTTACATTGCTGGTACAAACGGTACTTCTAACGG 297294
Query 75526 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCG 75585
| | ||||| ||| |||| || || || ||| || || ||||| | || ||| |
Sbjct 297295 TTTAATTCCTATGATTCGTGTTTTCAATAACACTGCCCGTTATGTTGACCA---GGGTGG 297351
Query 75586 TCGCAAGGG-----GTCCATC-GCGGTCTACTTGGAACCATGGCATGCCGATATCATGGA 75639
| |||| | || | | || | ||| |||||||||||||||| ||||| | ||
Sbjct 297352 TAACAAGAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATATTTGA 297411
Query 75640 GTTCCTTGAG-TTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTT 75698
|| |||| ||| || ||||| ||| | || || ||| |||||| | ||
Sbjct 297412 TTTTATTGATATTAGGAAG-AACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCC 297470
Query 75699 CATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTC 75758
| | || |||||||| || |||||||||||||| || || || ||| ||| |
Sbjct 297471 CTGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACAT 297530
Query 75759 TTTTCTGTCCAGACAAG-GCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCC 75817
| |||| |||| ||| || || ||| | ||| ||||| |||||||| ||
Sbjct 297531 TATTCTCTCCA-ACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCT 297589
Query 75818 CTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT 75877
|| || || || || | || ||| | | || |||| | |||| | |
Sbjct 297590 CTATATACCCGCTACGAGAAAGAAGGTCGTGGTAA---GACTATCAAAGCCCAAAAATTA 297646
Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937
||| | | ||| | || | || || || ||||| ||||| | | |||||||||||
Sbjct 297647 TGGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGAT 297706
Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997
|||||||||| || ||| ||||| || || || |||||| ||||| | |||
Sbjct 297707 GCTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCAAACTTATGC 297766
Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057
|||||| | || ||| ||| | ||||| || |||||||| || ||||| || |
Sbjct 297767 TGTGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTT 297826
Query 76058 GCCCTTCCAAAGTATGTCAATGAAG---------------AGACTCGCACTTTTGATTAT 76102
||| | ||| | || ||| |||| ||||| ||| | | |
Sbjct 297827 GCCTTACCA--GCAT-TCATTGAAACTTCTGAGGATGGTAAGACTTCCACATACAACTTC 297883
Query 76103 GAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGA 76162
||||| | |||||||| | || ||||||| ||| ||||| |||||||||| |
Sbjct 297884 AAAAAATTACATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGT 297943
Query 76163 AATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTG 76222
|||| || || ||||| ||| |||| || |||||| |||| ||||| |||| ||||
Sbjct 297944 AATTACTACCCTGTTGAAGAAGCGAGAAAATCCAATATGAGACATAGACCAATTGCTTTG 298003
Query 76223 GGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAA 76282
||||||||||||||||| || || || ||| || | |||||||||| || |||
Sbjct 298004 GGTGTTCAAGGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAA 298063
Query 76283 GCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGT 76342
||| | | ||| | ||||||||||| || ||||| || ||| |||| || |
Sbjct 298064 GCCCGTTTGCTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCT 298123
Query 76343 TGTGAATTGGCT--GAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCC 76400
|||||| | ||| |||| | ||| | || || || || | || ||||| || || |
Sbjct 298124 TGTGAACTAGCTCAGAAG--GACGGTCCATACGAAACTTTCCAAGGATCTCCTGCTTCTC 298181
Query 76401 AAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACGACTGGGATG 76460
|||| | || ||||||||||||||||| || || | || | || |||||
Sbjct 298182 AAGGTATACTACAGTTTGATATGTGGGACCAAAAACCCTACGGCATGTGGGATTGGGA-C 298240
Query 76461 TTCTCAAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAA 76517
|| ||| || | |||| | || | ||| || | | | || || ||||||||||
Sbjct 298241 ACCTTAAGAAAAGATATCATGAAGCATGGTATTAG--AAATTCCTTGACCATGGCACCAA 298298
Query 76518 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAA 76577
|||| || || ||||| | ||||| |||||| |||||||||| || |||||| |||
Sbjct 298299 TGCCTACTGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTCGAACCAGTCACTT 298358
Query 76578 CAAACATCTAC 76588
| || || |||
Sbjct 298359 CCAATATGTAC 298369
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596568272632640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |