Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739705.1_202016-09- 21] 178 sequences; 11,992,971 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq5 291 1e-73 >seq5 Length=561051 Score = 291 bits (322), Expect = 1e-73 Identities = 909/1391 (65%), Gaps = 46/1391 (3%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| || || | ||| |||||| || |||||||||| |||||| ||||| | ||||| Sbjct 298369 GTACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGA 298310 Query 110767 GGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATG-CG 110823 || || |||||||||||||| || || | | | || ||| | || | |||| | Sbjct 298309 TGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT--CTAATACCATGCTTCATGATATCT 298252 Query 110824 TTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883 || ||| || ||||| || | || | || || |||||||| |||||||| Sbjct 298251 TTTCTTAAGGTG-TCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTG 298193 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC--A 110941 || | ||||| || || ||||| || | || ||||| || | ||| | |||| | Sbjct 298192 TAGTATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTC--CTTCTGA 298135 Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001 || | |||||| || |||| ||| || ||||| || ||||||||||| | ||| Sbjct 298134 GCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTT 298075 Query 111002 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061 | | |||||| || |||||||||| | || ||| || || || |||||| Sbjct 298074 AGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGA 298015 Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 111121 ||||||||||||||| |||| ||||| |||| |||||| || |||| ||| ||||| Sbjct 298014 CCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACA 297955 Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181 || || |||| | |||||||||| ||||| ||| ||||||| || | |||||| Sbjct 297954 GGGTAGTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCA 297895 Query 111182 TGAAGTTTTTCATAATCAAAAGTGCGAGTCT---------------CTTCATTGACATAC 111226 || | ||||| | | | ||| ||||| |||| ||| || | Sbjct 297894 TGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGC 297836 Query 111227 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 111286 ||| | ||| | || ||||| || |||||||| || ||||| | ||| ||| || Sbjct 297835 --TGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCA 297778 Query 111287 AAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTC 111346 | |||||| |||||||| || ||| || || || || ||||| ||| || Sbjct 297777 ACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTT 297718 Query 111347 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGA 111406 |||| || ||||||||||| | | | | || || || || || || || | || | | Sbjct 297717 CTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAA 297658 Query 111407 ATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 111466 || | | ||| | || || | | || | || | || || || |||||| Sbjct 297657 ATGGAATACCATA-ATTTTTGG--GCTTTGATAGTCTTACCACGACCTTCTTTCTCGTAG 297601 Query 111467 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTC 111525 || || || || |||||||| ||||| ||| | ||| || || ||| Sbjct 297600 CGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGT- 297542 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 |||| |||| | | ||| ||| ||| || || |||||||||||||| || ||||| Sbjct 297541 TGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAAT 297482 Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 ||| || | | || | |||||| ||| || || | ||| ||||| || ||| Sbjct 297481 CCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTT-CTTCCTAA 297423 Query 111646 -CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAG 111698 |||| || || | ||||| || |||||||| || || || | || | || Sbjct 297422 TATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAG 297363 Query 111699 ATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 111758 || ||| | ||| | || | ||||| || || ||| || || || |||| || Sbjct 297362 GTCTCTTGTTA---CCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCA 297306 Query 111759 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 111818 | ||||| | ||| | || ||| ||||| || ||| ||| | | | | | Sbjct 297305 TAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAA 297246 Query 111819 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 111878 | |||||| || | |||||||| ||||| || || || ||||| ||| | | Sbjct 297245 TGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCA 297186 Query 111879 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 111938 || | || || || | ||| ||||||||||| |||| | | ||| ||| ||||| Sbjct 297185 AGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACA 297126 Query 111939 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT 111998 | || ||| |||| ||||| |||||||| | ||||| | |||||| | || ||| || Sbjct 297125 TTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGT-AAAATATTTT 297067 Query 111999 -GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057 | |||||| || || || || || ||| || || ||| ||||||||||| | | Sbjct 297066 AGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGT 297007 Query 112058 GCGACCCGCAT 112068 ||||| | ||| Sbjct 297006 GCGACTCTCAT 296996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030602628800