Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739705.1_202016-09-
21] 178 sequences; 11,992,971 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq5 190 3e-43
>seq5
Length=561051
Score = 190 bits (210), Expect = 3e-43
Identities = 827/1299 (64%), Gaps = 32/1299 (2%)
Strand=Plus/Minus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
|| ||||||| ||| ||| || || || ||||| | |||||| ||||||| ||||||
Sbjct 298368 TACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGAT 298309
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATG-CGTTC 118300
|| || ||||| ||||||||| | | || | | ||| | | | | || | ||
Sbjct 298308 GCAGTAGGCATTGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATCTTTT 298249
Query 118301 CTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAG 118360
||| || | |||||| || | || | | | | ||||||||||||||| ||
Sbjct 298248 CTTAAG-GTGTCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAG 298190
Query 118361 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 118420
|||||||| || || || ||||| | || || || ||||| || || || || |
Sbjct 298189 TATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTCCTTCTGAGCTAG 298130
Query 118421 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGC 118480
||| | || || | || || ||||| || |||||||| || | ||| |
Sbjct 298129 TTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAGCAA 298070
Query 118481 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 118540
||| || || |||||||| | | || ||| || || || |||||||||||
Sbjct 298069 ACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTG 298010
Query 118541 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATA 118600
||||| | ||||||| | |||||||||||| || || | || || || || ||
Sbjct 298009 AACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTA 297950
Query 118601 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 118660
|||| | ||| || || || |||| ||| || ||||| || | |||||||| |
Sbjct 297949 GTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAA 297890
Query 118661 CTTTTCGTAATCAAAACTGCGAGTCT---------------CTTCATTGACATACTTAGG 118705
|||| | | | | || ||||| |||| ||| || || ||
Sbjct 297889 TTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGCT--GG 297833
Query 118706 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 118765
| ||| | || |||| ||||| |||| || ||||| | | | ||| || | |||
Sbjct 297832 TAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAAT 297773
Query 118766 TTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 118825
||| ||| |||||||| ||| ||| || ||||| |||||||| || ||| ||||
Sbjct 297772 TTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTT 297713
Query 118826 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 118885
||| ||||||||||||| | | | || || || || || ||||| | | | ||| |
Sbjct 297712 ACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGA 297653
Query 118886 CTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGT 118945
| ||| | | ||| | ||| || | || || |||| |||||| ||
Sbjct 297652 ATACCATAATTTTTGGGCTTTGATAGT---CTTACCACGACCTTCTTTCTCGTAGCGGGT 297596
Query 118946 GTAGAGGGCTTCAAACTCTTCACC--CACGGCCTCTGAGAGCCCTGGTGCCTTAT-CTGG 119002
|| || || |||||||| ||||| || | || | | || || | || || |||
Sbjct 297595 ATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAA--CCAGGAG-CTGATGTTGG 297539
Query 119003 GCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 119062
|||| | | ||| ||| || || || ||||||||||| || || || |||||
Sbjct 297538 AGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCA 297479
Query 119063 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 119122
|| || | ||| | ||| | ||| ||| || | || || || | | ||
Sbjct 297478 TAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATC 297419
Query 119123 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTAC 119181
| ||| || | ||||| || ||||| ||||||||||| | || | | ||| |
Sbjct 297418 AATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCT 297359
Query 119182 GACG--ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAAT 119239
| |||| |||||| ||||| | |||||| || || ||||||| ||| |||||
Sbjct 297358 CTTGTTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAAT 297299
Query 119240 GATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTG 119299
| ||| | || || ||||| || ||| ||| | | | | | | ||
Sbjct 297298 TAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATG 297239
Query 119300 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 119359
||| || | ||||||||| || || || || || || || ||| | | || |
Sbjct 297238 GATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTC 297179
Query 119360 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGG 119419
||| ||||| ||||| ||||| |||| | || | | ||| || |||||||||||
Sbjct 297178 GTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGG 297119
Query 119420 CCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTG 119458
| || ||||| || ||||| | ||||| | |||||
Sbjct 297118 TTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTG 297080
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618433823981680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |