Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739705.1_202016-09- 21] 178 sequences; 11,992,971 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq5 248 1e-60 >seq5 Length=561051 Score = 248 bits (274), Expect = 1e-60 Identities = 867/1341 (65%), Gaps = 42/1341 (3%) Strand=Plus/Plus Query 104266 AGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACG 104324 ||| || || ||| || || || || || |||||| | || ||| || | ||||| Sbjct 297025 AGATATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTT-ACTCACG 297083 Query 104325 CAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTA 104384 | | ||||| | |||||||| ||||| |||| ||| ||||||||| ||| ||| | Sbjct 297084 CCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGG 297143 Query 104385 TCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAA 104444 | |||| ||||||||||| ||| | || || || | || | | ||| ||||| | Sbjct 297144 TTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGA 297203 Query 104445 TCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTC 104504 | || || ||||| |||||||| | || |||||| | | | | | | ||| Sbjct 297204 TTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCTT 297263 Query 104505 GTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACG 104564 ||| || ||||| ||| || | ||| | ||||| ||| |||| || || || Sbjct 297264 ACATTGCTGGTACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAATA 297323 Query 104565 CCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAGGGATCTA------TCGCAGTCT 104618 ||| || || ||||| | || | ||| | ||| || || | || | | Sbjct 297324 ACACTGCCCGTTATGTTGACCAGGGTGG---TAACAAGAGACCTGGTGCGTTTGCCCTTT 297380 Query 104619 ATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTG 104678 | || || |||||||| || ||||| | || || |||| | | ||||| ||| Sbjct 297381 ACCTGGAACCATGGCATGCTGATATATTTGATTTTATTGATATTAGGAAGAACCACGGTA 297440 Query 104679 ACGAGGAGGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATG 104737 | ||||| || ||| | ||| | ||| | ||||| |||||||| ||||| |||||| Sbjct 297441 AAGAGGAAATTCG-TGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATG 297499 Query 104738 AAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAG-GCACCTGGTCT 104796 ||| | || || || | ||| | ||| | | || | |||| ||| || |||||| | Sbjct 297500 AAGCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCA-ACATCAGCTCCTGGTTT 297558 Query 104797 CTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG 104856 |||| ||||| |||||||| || || || || |||||| |||||||||| Sbjct 297559 AAGCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCG 297618 Query 104857 GGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGA 104916 | | ||| | ||| | | ||| | | ||| | | ||||||| || Sbjct 297619 TGGTAA---GACTATCAAAGCCCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGA 297675 Query 104917 GACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAA 104976 ||||||||||| | | | ||||||| || || |||||| ||| ||||||||| || Sbjct 297676 AACTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAATCTAATCAAAAAAA 297735 Query 104977 TTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGA 105036 || ||||| |||||| || || | || ||||| | |||| ||| ||| Sbjct 297736 CTTAGGTGTCATCAAGTCATCAAACTTATGCTGTGAAATTGTTGAATACTCAGCTCCAGA 297795 Query 105037 TGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCC------------AAGTATGT 105084 ||| || ||||| |||||| | || || | || | || | | || Sbjct 297796 TGAAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGCATTCATTGAAACTTCTGA 297855 Query 105085 GGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCAC 105144 |||| |||| |||| | | ||||| | || ||| || | ||| ||| || Sbjct 297856 GGATGGTAAGACTTCCACATACAACTTCAAAAAATTACATGAAATTGCTAAAGTTGTTAC 297915 Query 105145 CAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATC 105204 || |||||||||| |||||| | |||| ||||| ||||| || | ||||| Sbjct 297916 TCGTAATTTAAACAGAGTCATTGATCGTAATTACTACCCTGTTGAAGAAGCGAGAAAATC 297975 Query 105205 TAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCT 105264 ||||||||||| | ||||||| | | |||||||| |||||||| || ||||| || Sbjct 297976 CAATATGAGACATAGACCAATTGCTTTGGGTGTTCAAGGTCTCGCTGACACTTTCATGCT 298035 Query 105265 TTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGAC 105324 | || |||||||||| || ||||| | ||| | || ||||| || Sbjct 298036 GTTACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTGCTAAATATCCAAATCTTTGAAAC 298095 Query 105325 CATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGA 105384 || ||||| ||| | | || || || || | || || || |||||||| || Sbjct 298096 TATTTATCATGCCTCCATGGAAGCTTCTTGTGAACTAGCTCAGAAGGACGGTCCATACGA 298155 Query 105385 AACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA 105444 ||| || | || ||||| ||||| ||||| | || || ||||||||||||| | | Sbjct 298156 AACTTTCCAAGGATCTCCTGCTTCTCAAGGTATACTACAGTTTGATATGTGGG-ACCAAA 298214 Query 105445 GACCAAGCTTCA-CTACGACTGGGAAGCTCTCAAGGAACG-CATCAAGGAGAAGGGTCTT 105502 ||| | || | || ||||| | || ||| || | |||| | || | ||| || Sbjct 298215 AACCCTACGGCATGTGGGATTGGGACAC-CTTAAGAAAAGATATCATGAAGCATGGTATT 298273 Query 105503 CGTAACAGTCTCCT----CATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGG 105558 | || |||| |||||| |||||||| || || ||||| | ||||| ||||| Sbjct 298274 AGAAA----TTCCTTGACCATGGCACCAATGCCTACTGCATCCACATCCCAAATATTGGG 298329 Query 105559 TAATAATGAATGCTTTGAACC 105579 | |||||||||| || ||||| Sbjct 298330 TTATAATGAATGTTTCGAACC 298350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259502244720