Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739735.1_202016-09-
21] 478 sequences; 12,268,615 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq12 125 1e-23
seq9 114 2e-20
seq15 109 8e-19
>seq12
Length=1057594
Score = 125 bits (138), Expect = 1e-23
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| | |||||||| ||||| || |||||||| ||||| ||||| | |
Sbjct 62675 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 62616
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| || | || |||||||||||| || |||||||| || || || ||
Sbjct 62615 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 62556
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | |||||||| || || ||| |||| ||| || |||| | || || |||
Sbjct 62555 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 62496
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTA 124767
|||||||| || || ||| | || | || || | || | |||||||
Sbjct 62495 ATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGTA 62447
Score = 114 bits (126), Expect = 2e-20
Identities = 176/253 (70%), Gaps = 15/253 (6%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA--- 124595
|||||||| || | || || |||||||| || |||||||| ||||| ||||| |
Sbjct 62918 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCCCTA 62859
Query 124596 -------AAT-----GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGT 124643
||| || || ||| || | ||| || ||||||||||||||||||
Sbjct 62858 GAGGTTGAATCTTCCGACACTATTGACAACGTCAAAAGTAAGATTCAAGATAAAGAAGGT 62799
Query 124644 ATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACA 124703
|| || || |||||||| || | |||||||| || || ||| |||| ||| || ||||
Sbjct 62798 ATCCCTCCGGATCAACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACC 62739
Query 124704 TTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGT 124763
|| || || || || ||||| ||||| ||| | || ||||| || | || |||||
Sbjct 62738 TTGTCTGACTACAACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGT 62679
Query 124764 GGTATTAAAAATT 124776
||||| ||| ||
Sbjct 62678 GGTATGCAAATTT 62666
Score = 91.5 bits (100), Expect = 2e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || | ||||| | || || ||||| ||||| | || ||||| |
Sbjct 63374 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 63315
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || || | || |||||||||||| || |||||||| || || ||||||
Sbjct 63314 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 63255
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | || ||||| || || || |||| || || |||| | ||||| ||
Sbjct 63254 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 63195
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| || || || || || ||| | || || | || ||||||||||
Sbjct 63194 ATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTAT 63145
>seq9
Length=451053
Score = 114 bits (126), Expect = 2e-20
Identities = 158/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 124548 TTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATT 124607
||| | ||||| | || || || || || ||| | || ||||| | ||| || |||
Sbjct 77628 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 77687
Query 124608 TCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTT 124667
||| | || || |||||||| || |||||||| |||||||| |||||||| |
Sbjct 77688 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 77747
Query 124668 ATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAA 124727
|| ||||| || || ||||| || || || |||| || || || || |||||||||
Sbjct 77748 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 77807
Query 124728 GAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| |||||||| || || || | || ||||||||||
Sbjct 77808 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTAT 77848
>seq15
Length=1060034
Score = 109 bits (120), Expect = 8e-19
Identities = 358/556 (64%), Gaps = 28/556 (5%)
Strand=Plus/Plus
Query 205318 CtttttatttttaattttGGAAATGGGTTTGGTGTACGTTCTAATTGtttttttAATCCA 205377
||||| || |||| ||| || ||||| |||| | | | ||||| ||| || ||
Sbjct 453439 CTTTTAATCTTTAGTTTCGGGAATGGTCTTGGATTTCTGGAGATTTGTTCTTTCAAGGCA 453498
Query 205378 TTAATATGATTAACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTTTT 205437
| ||| || | ||| | |||||||| || | | ||||||| || ||| ||| |
Sbjct 453499 TCAATGTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACTCACCTGGCTCC 453558
Query 205438 AAATTAGTTAAATGT-GCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGG 205496
| | | || | | |||||||| |||||| ||| ||| |||| ||||| ||
Sbjct 453559 ATGTC-GACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAATGTTAAACGG 453617
Query 205497 TACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAG------------ 205544
||| || || ||||||||| || | ||| |||| | |||| |||
Sbjct 453618 TACTCCCAACCCCATATCACAAGAACGTTGGTACAATAAGCATGAAAGGCGGGGCTTACC 453677
Query 205545 --ATATTTATTATTAATT----------ACATGAAATTGTACAAAACAATGACAAGGTGG 205592
|| || | || || |||| || ||| |||| ||| || |||||
Sbjct 453678 GGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAAATATGGCATGGTGG 453737
Query 205593 TATAACCATATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTC 205652
| | |||| || |||| ||| || |||||||| | | || || ||||| |
Sbjct 453738 CAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATGATTCTTCTATCGTA 453797
Query 205653 AGGtttattttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATA 205712
|| || | || | ||||| |||| ||| | |||||||||| ||||| |||||
Sbjct 453798 GGGATTTGTCTTAAGTTTATGAATAACCTGTTTCAATTGATCAATACCTTGTCCAGTATA 453857
Query 205713 ATTTGTATC-CATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTG 205771
| ||| || || | ||||||||||||||||| | ||||||||| |||||||| |
Sbjct 453858 GTCGTCATCGCACGTCT-TGTATTTAGCACCAAAATGCCTCCATTGAAATCCATAAACGG 453916
Query 205772 GACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttATATATTTTAATGATC 205831
| || | ||| ||| |||| ||||| || || || || | || ||||| ||||
Sbjct 453917 GCCCCAGATCTCCTACTTTCCTATCTTTGAACCCCATCTTATCTAAATATTCACGAGATC 453976
Query 205832 CATTTTCATCCCAAAT 205847
|||| | ||||||||
Sbjct 453977 CATTACCGTCCCAAAT 453992
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755451486150400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |