Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739735.1_202016-09- 21] 478 sequences; 12,268,615 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq12 102 6e-17 >seq12 Length=1057594 Score = 102 bits (112), Expect = 6e-17 Identities = 169/243 (70%), Gaps = 17/243 (7%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || | || ||| |||||||| || | ||| |||||||| | ||||| || ||| Sbjct 62677 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 62736 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || | | || || | ||| || || ||||||||||||| ||||||||| | || Sbjct 62737 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 62796 Query 43003 ACACCTTCTTTTTCGCTGATC-AACTCTTTGACTCTGCCAACTGTGTCG------CCAGC 43055 | ||||||||| || ||| ||| |||||| || ||| |||||| || | Sbjct 62797 ATACCTTCTTTATCTTGAATCTTACT-TTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 62855 Query 43056 C---------TCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTG 43106 | || || |||| |||||||| || || ||||||||||| || |||||||| Sbjct 62856 CTCTAGGGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTG 62915 Query 43107 CAT 43109 ||| Sbjct 62916 CAT 62918 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || | || ||| || ||||| || | ||| |||||||| | ||||| |||||| Sbjct 494919 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 494860 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || | | || |||||||| || || ||||| ||||||| ||||| || | || Sbjct 494859 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 494800 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||| || || |||| ||||| || ||| ||||| || || || Sbjct 494799 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 494740 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112 || | || ||||| || ||||||| ||| || || ||||||||||| || Sbjct 494739 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 494690 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/202 (70%), Gaps = 8/202 (4%) Strand=Plus/Plus Query 42912 AGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCC 42971 |||| ||||||||| | |||||| || |||| || | | || || | ||| || || Sbjct 62478 AGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACC 62537 Query 42972 GGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGA----TCAACT 43027 |||||||||||||| || || || | || | |||||| || || ||| || || Sbjct 62538 GGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC-TTGAATTTTCGAC- 62595 Query 43028 CTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTA 43087 || || || ||| ||||| || || || |||| |||||||| || || || | Sbjct 62596 --TTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCA 62653 Query 43088 GAGTTTTCACAAAAATTTGCAT 43109 | || || |||||||||||||| Sbjct 62654 GTGTCTTGACAAAAATTTGCAT 62675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381367378283724