Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739775.1_202016-09-
21] 157 sequences; 11,906,575 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq12 104 2e-17
seq9 89.7 5e-13
>seq12
Length=1048970
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || || | | || |||||||| ||||||||||| |
Sbjct 61874 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 61933
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || || || ||||||| | |||| | | |||||| || |||||
Sbjct 61934 AAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGG 61993
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|||||||| ||||| |||||| || | | || | ||||||| || || |||
Sbjct 61994 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 62053
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | |||||||| |||| ||| || ||||| ||||||||
Sbjct 62054 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 62100
Score = 100 bits (110), Expect = 3e-16
Identities = 148/206 (72%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 138411 ATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTG 138470
||||| | | |||||||| ||||||||||| || || || | ||| || || ||
Sbjct 62125 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 62184
Query 138471 TTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTT 138530
||||||| | |||| | | ||||| || ||||| |||||||| ||||| ||| |||
Sbjct 62185 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTC-TTGAATTT 62243
Query 138531 TTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCA 138588
| | |||| ||| || | ||| |||| || || || || | || | ||||||||
Sbjct 62244 TCGACTTAACGTTG-TCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCG 62302
Query 138589 GTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| ||| || || |||||||||||
Sbjct 62303 GTCAAAGTCTTGACGAAAATCTGCAT 62328
>seq9
Length=429894
Score = 89.7 bits (98), Expect = 5e-13
Identities = 311/482 (65%), Gaps = 10/482 (2%)
Strand=Plus/Plus
Query 153087 GGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCC 153146
||||| ||| |||| |||| || || ||||| | || | ||||| ||||| |||
Sbjct 236642 GGTTCGAAGCATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCC 236701
Query 153147 ACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCC 153206
| |||||| || | || || || |||||| | | || | | |||||||
Sbjct 236702 ATAGTCAAAGAGTTTCTTAACCCATGTTTAACAATGTCCTTTCTTAAGGTTTCCCAATCC 236761
Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGA 153266
|||| | | ||| | ||||||||||| ||| | ||||| | || | || |||
Sbjct 236762 CACATGCCAAATGGTTTAGCGTTCCACATATCGAATTGTAAAATACCCTTAGAAGCTGGA 236821
Query 153267 CTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGC 153326
|| |||| ||| || | || || |||||||| ||| ||| || || ||
Sbjct 236822 GAACCTTCAAAAGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTCAAGA 236881
Query 153327 GCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTCG 153386
| ||| ||| || |||||| ||||||||| || ||| |||||||| ||
Sbjct 236882 GTAGCATGGTAAATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTCCGATTCA 236941
Query 153387 TACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGT 153446
| || | |||| || || | | | ||||||| |||||||| ||| | | || |||
Sbjct 236942 AAGGGTAGACGCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAATAGGT 237001
Query 153447 CGATGCTTC-TCGTTG--CTGC--GCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGA 153501
| ||||||| | ||| | | |||||| | | ||||||| ||| || ||||
Sbjct 237002 CTATGCTTCATATTTGAATTTCTAGCCTCG-----GGAACTGGATAGTAATTACGGTCGA 237056
Query 153502 TAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCAT 153561
||| | |||| | |||| | | ||||||| ||| | | | | ||||||||| ||
Sbjct 237057 TAACTCTGTTCAAGTTGTGAGTAATGACTTTAGCAATCTCGTGTAATCTCTCGAAATTAT 237116
Query 153562 AG 153563
||
Sbjct 237117 AG 237118
Score = 82.4 bits (90), Expect = 8e-11
Identities = 153/221 (69%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| ||||| || | | || || ||||||||||||||||| |
Sbjct 73667 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 73608
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || | ||| ||||| | | |||| | | |||||||| || ||
Sbjct 73607 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 73548
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| | |||| || |||| || | ||||| | || || |
Sbjct 73547 ATACCTTCCTTGTC-TTGAATCTTTGACTTGACATTG-TCAATAGTGTCAGAAGATTCAA 73490
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606
| || | || | || |||||||||| ||| || ||||||
Sbjct 73489 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 73449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496261426085040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |