Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739815.1_202016-09-
21] 438 sequences; 12,182,130 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq12 107 2e-18
seq9 95.1 1e-14
>seq12
Length=1056182
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| || ||||| |||| ||| ||| ||||||||||| || || |
Sbjct 64247 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 64306
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| | | |||| |||||||| || ||||| || ||||| | ||||| || |||||
Sbjct 64307 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 64366
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||| |||||||| |||||| || || | | |||| | || |||
Sbjct 64367 ATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 64426
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| | ||| || ||||| || || ||||| || || || ||||||||
Sbjct 64427 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 64473
Score = 100 bits (110), Expect = 2e-16
Identities = 165/236 (70%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| || |||||||| || || ||||| || |||||||||||| |
Sbjct 496178 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 496119
Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | | | || |||| ||| || || || || ||||| | |||||||| || |
Sbjct 496118 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 496061
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||| |||||||| || || ||| || | | |||| | || |
Sbjct 496060 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 496001
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343
| |||| |||||| ||||| || || | |||||| || || |||||||| ||| ||
Sbjct 496000 CTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTGGCT 495945
Score = 84.2 bits (92), Expect = 2e-11
Identities = 160/239 (67%), Gaps = 12/239 (5%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCT------------CTCCTTCTGAATG 45157
|||||||||||||| || ||||| |||| ||| ||| |||||||||
Sbjct 64007 CCACCTCTCAATCTCAACACCAAATGCAACGTNNNNNNNNNNGTAGACTCTTTCTGAATG 64066
Query 45158 TTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGT 45217
|| || || ||| | | |||| |||||||| || ||||| || ||||| | |||
Sbjct 64067 TTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGT 64126
Query 45218 TGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCC 45277
|| || ||||| | ||| |||||||| |||||| || || | | ||||
Sbjct 64127 TGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCG 64186
Query 45278 CCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| || ||||| | ||| || ||||| || || ||||| || || || ||||||||
Sbjct 64187 GAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 64245
>seq9
Length=442811
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| || || ||||||| ||| || || |||||||||||||| |
Sbjct 75665 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 75606
Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
| ||| | | |||| |||| ||| || || || || ||||| | |||||||| || |
Sbjct 75605 AAGGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 75548
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||| |||||||| ||| ||| ||| || | | |||| | || |
Sbjct 75547 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 75488
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAA 45327
| |||| || || ||||| || |||| |||||| |||||
Sbjct 75487 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 75448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395073091039198
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |