Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739815.1_202016-09-
21] 438 sequences; 12,182,130 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq12 102 6e-17
>seq12
Length=1056182
Score = 102 bits (112), Expect = 6e-17
Identities = 164/233 (70%), Gaps = 12/233 (5%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||||||||| || |||||||| || ||||| ||| || | || || ||| ||
Sbjct 64473 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 64414
Query 27850 GACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| | | |||| |||||| ||||| ||||| |||||| |||| || |
Sbjct 64413 GACACTATTGACAAC--GTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATC 64356
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACG----AACGCAGCTTGTCCGAT 27963
| ||| | || ||||||||||| || ||| |||| |||| ||||| |||| |||
Sbjct 64355 AACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGC----TGTCTGAT 64300
Query 27964 TACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|| ||||| || |||||| || ||||||||||| ||| | ||| | || ||
Sbjct 64299 TATAACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 64247
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 12/198 (6%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||||||||| || |||||||| || ||||| ||| || | || || ||| ||
Sbjct 64245 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 64186
Query 27850 GACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| | | |||| |||||| ||||| ||||| |||||| |||| || |
Sbjct 64185 GACACTATTGACAAC--GTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATC 64128
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGAC----GAACGCAGCTTGTCCGAT 27963
| ||| | || ||||||||||| || ||| |||| ||| |||||| |||| |||
Sbjct 64127 AACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGC----TGTCTGAT 64072
Query 27964 TACAACATCCAAAAAGAG 27981
|| ||||| || ||||||
Sbjct 64071 TATAACATTCAGAAAGAG 64054
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355860500362026
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |