Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739825.1_202016-09- 21] 443 sequences; 12,174,042 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq186 185 2e-41 seq70 167 5e-36 seq12 163 7e-35 seq10 149 1e-30 seq11 138 3e-27 seq9 132 1e-25 seq248 91.5 3e-13 >seq186 Length=467 Score = 185 bits (204), Expect = 2e-41 Identities = 179/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | || | || | ||| || ||||| ||||||||||| ||||| ||| Sbjct 320 ATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCA 261 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || |||||||||||||| ||||| || ||||||||||| | ||||||||||| ||| Sbjct 260 GACAGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGA 201 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||||||||| |||||||| ||| || || || | || ||| || ||| Sbjct 200 GGGATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCA 141 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||||| || |||||||| || || || ||||| || || || ||||| Sbjct 140 ACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 91 Score = 120 bits (132), Expect = 7e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 ||||| || ||||||||||| | ||||||||||| ||||| || ||||||||||| ||| Sbjct 467 AGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGA 408 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| ||| || || || | || ||| || ||| |||||||| || |||||||| Sbjct 407 ATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTC 348 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| || || || ||||| Sbjct 347 CCTGTTAGAGTTTTGACGAAAATTTGCAT 319 >seq70 Length=593 Score = 167 bits (184), Expect = 5e-36 Identities = 155/197 (79%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||| || || || || |||||||| | |||||||| ||||||||||| || ||| Sbjct 307 GTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCA 366 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| | ||||||||||| ||||| || ||||||||||| |||||||| ||| Sbjct 367 GCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATCTTACTTTTG 426 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | || ||| || ||| |||||||| || |||||||| || || || ||| Sbjct 427 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 486 Query 104543 TTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 487 TTGACGAAAATTTGCAT 503 Score = 140 bits (154), Expect = 7e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || |||||||| ||||| || || |||||||| ||||||||||| || || Sbjct 79 GTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCG 138 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| | || || || || ||||| || ||||| || || ||||| || | || Sbjct 139 GCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 198 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | || || || ||| |||||||| || ||||||||||| || ||||| Sbjct 199 ACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTC 258 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 259 TTGACAAAAATTTGCAT 275 >seq12 Length=1051691 Score = 163 bits (180), Expect = 7e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||||||| || || |||||||| || || || |||||||| || || ||| Sbjct 63384 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 63443 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||||||||||||||| || || || ||||| || | || |||||||| ||| Sbjct 63444 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 63503 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || || ||||| || | || || || || | ||||||| || ||| Sbjct 63504 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 63563 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | ||| || || ||||| || | || || || || |||||||| Sbjct 63564 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 63613 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || |||||||| ||||| || || |||||||| ||||||||||| || || Sbjct 62961 GTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCG 63020 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| | || || || || ||||| || ||||| || || ||||| || | || Sbjct 63021 GCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 63080 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | || ||| || ||| |||||||| || |||||||| || || || ||| Sbjct 63081 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 63140 Query 104543 TTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 63141 TTGACGAAAATTTGCAT 63157 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||| || || || || |||||||| | ||||||||||||||||| || || || Sbjct 63189 GTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCG 63248 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | |||||||||||| ||||| || ||||| || ||||| || || | || Sbjct 63249 GCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTA 63308 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | || ||| | ||| ||||||| || || || ||||| || | || Sbjct 63309 ACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTC 63368 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 63369 TTAACAAAGATCTGCAT 63385 Score = 125 bits (138), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 |||| |||||||| || || || || ||||| || | ||||||||| ||||| | ||| Sbjct 496189 TGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGC 496130 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || |||||||| || | || ||||| ||||| || || ||||| || || || ||||| Sbjct 496129 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTG 496070 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | || ||||| || | || || || ||| || || || |||||||||||||| || Sbjct 496069 GACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTT 496010 Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563 | || || || || || ||||| ||| Sbjct 496009 AAAGTCTTGACGAAAATTTGCATCTTG 495983 Score = 91.5 bits (100), Expect = 3e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || |||||||| ||||| || || |||||||| ||||||||||| || || Sbjct 62712 GTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCG 62771 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTT 104475 |||||||| | || || || || ||||| || ||||| || || ||||| || Sbjct 62772 GCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTT 62824 >seq10 Length=747519 Score = 149 bits (164), Expect = 1e-30 Identities = 376/564 (67%), Gaps = 26/564 (5%) Strand=Plus/Plus Query 268745 TACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTA 268804 ||||| | |||| |||||||| ||||| | |||||| | ||| ||||| | || | Sbjct 391178 TACAAGCGTGCCGAAGCTTCTTTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATC 391237 Query 268805 ATAGATTGGAAAAATTTAA--AACCAGAA-GAAAGAAGATTTATATCTTATATTCTTGCG 268861 || ||||| || || ||| |||| || ||| || || || ||||||| Sbjct 391238 CATGACTGGAACAACAGAATGAACGAGAACGAGAGATTTTTCATTTCCAGAGTTCTTGCC 391297 Query 268862 TTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAG 268921 ||||| || | | ||| ||||| ||||| ||||| | || || || |||| || Sbjct 391298 TTTTTCGCCGCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACCGAA 391357 Query 268922 GTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCAT 268981 || || ||||| || || | |||| ||||| ||||| || || ||||||||||| Sbjct 391358 GTCCAAATTCCAGAGGCAAAGAGTTTCTACGGTTTCCAAATCATGATTGAAAATATTCAC 391417 Query 268982 TCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAA-G 269040 || || | ||| | || || ||||| || || | || | ||||||| | Sbjct 391418 TCTGAAACTTACTCCTTGTTGATCGATACCTACATCAAGGAC-----CCTAAAGAAAGTG 391472 Query 269041 ACTATTTTCTTCTATGAGA-----ACTAT----GGACTGTGTGAGaaaaaaaTCTGAATG 269091 | | | || ||| ||| | || || | | | ||||||| | ||||| Sbjct 391473 AAT-TCTTGTTCAATGCCATTCACACCATCCCAGAAATCGGTGAGAAGG----CCGAATG 391527 Query 269092 GGCTCTGAAATGGATAAACGATAGCG-CGCCTTAC--GGAGAAAGGTTAGTTGCTTTTGC 269148 |||| | | |||||| | || | |||||| || ||||| ||||||| ||||| Sbjct 391528 GGCTTTAAGATGGATTCAAGACGCTGACGCCTTGTTTGGTGAAAGACTAGTTGCCTTTGC 391587 Query 269149 CGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAG 269208 | | | |||||| | || || || || || |||||| | || || |||||||| || || Sbjct 391588 CTCCATTGAAGGTGTCTTTTTCTCCGGTTCCTTTGCCTCCATTTTCTGGTTGAAAAAGAG 391647 Query 269209 AGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACA 269268 ||| | ||||| || ||||| || || ||||||||||| | || ||||||||||| || Sbjct 391648 AGGTATGATGCCCGGTTTAACCTTTTCCAACGAATTGATCTGTAGAGACGAAGGTTTGCA 391707 Query 269269 CTGCGACTTCGCTTGTTTATTATT 269292 | |||||| || || || || || Sbjct 391708 CACCGACTTTGCATGCTTGTTGTT 391731 >seq11 Length=648892 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| || | || | |||||| || ||||| || || || || |||||| Sbjct 621582 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 621641 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||||||||||||||||||| | ||| || |||||||| || | || ||||| ||||| Sbjct 621642 GATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 621701 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || || || ||||| | || ||||| || | ||| || || ||| Sbjct 621702 GGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCA 621761 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535 || || | || || ||||||||||| Sbjct 621762 ACTTCCAAAGTGATGGTCTTACCAGT 621787 >seq9 Length=439393 Score = 132 bits (146), Expect = 1e-25 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | || | |||| || || || |||||||| ||||| || |||||| Sbjct 77380 ATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCA 77321 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | |||||||||||||| | ||| || |||||||| || | || ||||| ||||| Sbjct 77320 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 77261 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || || |||||||||| || ||||| || | || || || ||| Sbjct 77260 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 77201 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 || || | || || ||||||||||| | || || ||||| Sbjct 77200 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 77160 >seq248 Length=442 Score = 91.5 bits (100), Expect = 3e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || |||||||| ||||| || || |||||||| ||||||||||| || || Sbjct 317 GTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCG 376 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTT 104475 |||||||| | || || || || ||||| || ||||| || || ||||| || Sbjct 377 GCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTT 429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151391864734644