Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739825.1_202016-09-
21] 443 sequences; 12,174,042 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq12 113 4e-20
seq186 102 8e-17
seq70 93.3 4e-14
>seq12
Length=1051691
Score = 113 bits (124), Expect = 4e-20
Identities = 153/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
||| | ||||| || ||||| || ||||| |||||||| || ||| | | || ||
Sbjct 63404 CACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTC 63463
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
|||||| || || || ||||||||| || ||||| ||||| || || ||||||||
Sbjct 63464 TAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTG 63523
Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082
|||||| ||| | ||||| ||| ||| || | | || ||||| | || | ||||
Sbjct 63524 AATTTTCGACTTAACGTTGT-CGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTT 63582
Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| ||||||| ||| || || |||||||||||
Sbjct 63583 TACCGGTCAAAGTCTTGACGAAAATCTGCAT 63613
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| |||||||||||||| || || ||| | | ||| ||||| || || ||
Sbjct 62961 GTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCG 63020
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| | ||||||| ||||| || ||||| || || |||||||| |||||| |||
Sbjct 63021 GCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 63080
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| || | ||||| | | || || || | ||| | || || || || |||||
Sbjct 63081 ACGTTG-TCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGT 63139
Query 127096 TTTTACAAAAATCTGCAT 127113
||| || ||||| |||||
Sbjct 63140 TTTGACGAAAATTTGCAT 63157
>seq186
Length=467
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| | |||| |||||||||||| | |||||||||||| ||||| || ||||| |
Sbjct 317 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 258
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||| | | || || || || || ||||| | ||||||| ||| ||||| |||||
Sbjct 257 AGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 198
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || || || || || || |||| |||| || | ||||| | | || ||
Sbjct 197 ATACCTTCTTTATCTTGAATCTTACTTTTGACGTTG-TCAATAGTGTCGGAAGATTCAAC 139
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | || || || || |||||||| || ||||| |||||
Sbjct 138 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 91
>seq70
Length=593
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| |||||||||||||| || || ||| | | ||| ||||| || || ||
Sbjct 79 GTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCG 138
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| | ||||||| ||||| || ||||| || || |||||||| |||||| |||
Sbjct 139 GCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 198
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| || | ||||| | | || || || | ||| | || || || ||||| ||
Sbjct 199 ACGTTG-TCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGT 257
Query 127096 TTTTACAAAAATCTGCAT 127113
|| |||||||| |||||
Sbjct 258 CTTGACAAAAATTTGCAT 275
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475498166914320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |