Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739825.1_202016-09-
21] 443 sequences; 12,174,042 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq12 123 2e-23
seq186 114 8e-21
seq70 102 5e-17
seq9 93.3 3e-14
seq248 82.4 5e-11
>seq12
Length=1051691
Score = 123 bits (136), Expect = 2e-23
Identities = 167/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | |||||||| || ||||| || ||||| |||||||| || ||
Sbjct 63158 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 63217
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | |||| || | || || |||||||| ||||| | ||| |||||| | ||
Sbjct 63218 CAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGG 63277
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| |||||| | | ||| | || | |||||| ||||| |
Sbjct 63278 GATACCTTCCTTGTCCTGGATTTTC-GACTTAACGTTATCGATCGTGTCGGAGGATTCAA 63336
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| |||||||| || || || || |||||||||||||||
Sbjct 63337 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCATA 63386
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||| | | || ||| | ||||| ||| ||| || || ||||||||||| ||
Sbjct 63386 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 63445
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | |||| || | || || |||||||| ||||| | || |||||| | ||
Sbjct 63446 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 63505
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||||||| | | ||| | ||| | ||| ||| ||||| |
Sbjct 63506 GATACCTTCCTTGTCTTGAATTTTC-GACTTAACGTTGTCGATGGTATCGGAAGATTCAA 63564
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || |||||||| || || || || || || |||||||||
Sbjct 63565 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATA 63614
Score = 107 bits (118), Expect = 1e-18
Identities = 165/233 (71%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578
|| |||||| ||||| | || || | || |||||| ||| ||||| || ||||| ||
Sbjct 62927 GTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTC 62986
Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638
|| || || | | || || | ||| || |||||||||||||| | ||||| ||| |
Sbjct 62987 CGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGG 63046
Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATT 33697
|| | |||||| ||||| ||||||| | | ||| | ||| | |||||| ||||
Sbjct 63047 AGGAATACCTTCCTTGTCTTGAATTTTC-GACTTAACGTTGTCAATAGTGTCGGAAGATT 63105
Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || || | || || || || ||||||| ||||| || || || ||||||
Sbjct 63106 CAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 63158
Score = 93.3 bits (102), Expect = 3e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||||||| | || ||||| |||||||| || ||||| |||||||| ||||
Sbjct 496215 CACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGG 496156
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || | | || |||||||| || || ||||| ||||| | || || || | |
Sbjct 496155 ACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 496096
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | |||||| ||||| || || | | |||| ||| | ||||| |||||
Sbjct 496095 GAATACCTTCCTTGTCTTGGATCTT-GGACTTGACATTGTCAATAGTGTCAGAAGATTCA 496037
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | || || || ||||| ||||| || || || || || |||||
Sbjct 496036 ACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 495987
Score = 82.4 bits (90), Expect = 5e-11
Identities = 107/148 (72%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578
|| |||||| ||||| | || || | || |||||| ||| ||||| || ||||| ||
Sbjct 62678 GTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTC 62737
Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638
|| || || | | || || | ||| || |||||||||||||| | ||||| ||| |
Sbjct 62738 CGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGG 62797
Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTC 33666
|| | |||||| ||||| |||||||
Sbjct 62798 AGGAATACCTTCCTTGTCTTGAATTTTC 62825
>seq186
Length=467
Score = 114 bits (126), Expect = 8e-21
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | ||||||||||| | || |||||| || ||||| ||||| ||
Sbjct 318 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 259
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | |||| |||| ||| || || ||||||||||| | ||| ||||| | ||
Sbjct 258 CAGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 199
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||||||| || ||| || ||| || | ||| | |||||| ||||| |
Sbjct 198 GATACCTTCTTTATCTTGAATCTT-ACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 140
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || || || ||||||| ||||| || || || ||||||
Sbjct 139 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 90
>seq70
Length=593
Score = 102 bits (112), Expect = 5e-17
Identities = 164/233 (70%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578
|| |||||| ||||| | || || | || |||||| ||| ||||| || ||||| ||
Sbjct 45 GTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTC 104
Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638
|| || || | | || || | ||| || |||||||||||||| | ||||| ||| |
Sbjct 105 CGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGG 164
Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATT 33697
|| | |||||| ||||| ||||||| | | ||| | ||| | ||||| ||||
Sbjct 165 AGGAATACCTTCCTTGTCTTGAATTTTC-GACTTAACGTTGTCAATAGTGTCAGAAGATT 223
Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || || | || || || |||||||| | || || ||||| || ||||||
Sbjct 224 CAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 276
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | |||||||| || ||||| || ||||| |||||||| || ||
Sbjct 276 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 335
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | || || | ||| || || ||||||||||| | ||| ||||| | ||
Sbjct 336 CAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 395
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||||||| || ||| || ||| || | ||| | |||||| ||||| |
Sbjct 396 GATACCTTCTTTATCTTGAATCTT-ACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 454
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || || || ||||||| ||||| || || || ||||||
Sbjct 455 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 504
>seq9
Length=439393
Score = 93.3 bits (102), Expect = 3e-14
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | || || || || | |||| |||||||| |||||||| || ||
Sbjct 77378 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 77319
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | |||| |||||||| || || ||||| ||||| | || || || | ||
Sbjct 77318 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 77259
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||| || || | |||| ||| | ||||| ||||| |
Sbjct 77258 GATACCTTCCTTGTCTTGAATCTT-TGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 77200
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740
| || | ||||| || ||||| || || || || |||||
Sbjct 77199 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 77160
>seq248
Length=442
Score = 82.4 bits (90), Expect = 5e-11
Identities = 107/148 (72%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578
|| |||||| ||||| | || || | || |||||| ||| ||||| || ||||| ||
Sbjct 283 GTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTC 342
Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638
|| || || | | || || | ||| || |||||||||||||| | ||||| ||| |
Sbjct 343 CGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGG 402
Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTC 33666
|| | |||||| ||||| |||||||
Sbjct 403 AGGAATACCTTCCTTGTCTTGAATTTTC 430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328702225306560
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