Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739825.1_202016-09-
21] 443 sequences; 12,174,042 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq12 107 2e-18
seq70 105 6e-18
seq186 102 7e-17
seq248 95.1 1e-14
seq9 89.7 5e-13
>seq12
Length=1051691
Score = 107 bits (118), Expect = 2e-18
Identities = 170/242 (70%), Gaps = 4/242 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || ||||| |||| || || | || || | || || ||| | |
Sbjct 63157 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 63098
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || || |||||| || || || ||||| || || || |||
Sbjct 63097 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 63038
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|||||| | |||| | ||| || ||||| ||||||| ||||| |||| | | ||||
Sbjct 63037 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGG--ACTACA 62980
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGATCAT 25412
|||||||||| || ||||| |||| | || || || ||||| || || || ||||||
Sbjct 62979 ATATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGTAACTGATCAG 62920
Query 25413 TC 25414
||
Sbjct 62919 TC 62918
Score = 95.1 bits (104), Expect = 1e-14
Identities = 117/158 (74%), Gaps = 4/158 (3%)
Strand=Plus/Minus
Query 25259 AAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAA 25318
|||||| || || || ||||| || || || ||||||||| | |||| | ||| ||
Sbjct 62824 AAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAAAGATTGATTTTTGCCGGTAAG 62765
Query 25319 CAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAAAAGAATCCACCATTC 25376
||||| ||||||| ||||| |||| | | |||||||||||||| || ||||| |||
Sbjct 62764 CAACTAGAAGATGGTAGAACGCTGTCGG--ACTACAATATTCAAAAGGAGTCCACTCTTC 62707
Query 25377 ATTTAGTGTTAAGATTGAGAGGAGGAAAATGATCATTC 25414
| | || || || ||||| || || || |||||| ||
Sbjct 62706 ACCTTGTCTTGAGGTTGAGGGGTGGTAACTGATCAGTC 62669
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||| || || || ||||| ||| | ||||| | || || ||| || |
Sbjct 63385 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 63326
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || ||||| | || || ||||| || || || ||||| || || |||||
Sbjct 63325 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 63266
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|| || | || | | ||| || || || ||||| | ||||| |||| | | ||||
Sbjct 63265 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTG--ACTACA 63208
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| || ||||| ||||| || |||| || ||||| ||||||||||| ||
Sbjct 63207 ACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 63159
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
||| |||||| | || || || || |||||||| || | || || | ||||| ||| |
Sbjct 495983 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATC 496042
Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290
|| ||||| || | || || || || || || || ||||| || || ||
Sbjct 496043 TTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGA 496102
Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350
|| |||||| | || | | || || ||| | ||||||| ||||| | | ||| ||
Sbjct 496103 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTA 496162
Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
||| || ||||| ||||| || | || || || || ||||||||||| ||
Sbjct 496163 CAACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 496213
>seq70
Length=593
Score = 105 bits (116), Expect = 6e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || ||||| |||| || || | || || | || || ||| | |
Sbjct 503 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 444
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || ||| || ||| |||||||| ||||| || || |||||
Sbjct 443 GACACTATTGACAACGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 384
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|| ||| | |||| | || || ||||| ||||||| ||||| |||| | | ||||
Sbjct 383 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTG--ACTACA 326
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| || ||||| ||||| || |||| || ||||| ||||||||||| ||
Sbjct 325 ACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 277
Score = 102 bits (112), Expect = 7e-17
Identities = 169/242 (70%), Gaps = 4/242 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| || ||| | || || || | || || | || || ||| |
Sbjct 275 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 216
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || || |||||| || || || ||||| || || || |||
Sbjct 215 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 156
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|||||| | |||| | ||| || ||||| ||||||| ||||| |||| | | ||||
Sbjct 155 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGG--ACTACA 98
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGATCAT 25412
|||||||||| || ||||| |||| | || || || ||||| || || || ||||||
Sbjct 97 ATATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGTAACTGATCAG 38
Query 25413 TC 25414
||
Sbjct 37 TC 36
>seq186
Length=467
Score = 102 bits (112), Expect = 7e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || ||||| |||| || || | || || | || || ||| | |
Sbjct 91 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 150
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || ||| || ||| |||||||| ||||| || || |||||
Sbjct 151 GACACTATTGACAACGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 210
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|| ||| | |||| | || || ||||| ||||| | ||||| |||| | |||| |
Sbjct 211 CAGAGATTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTG--ATTATA 268
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| ||||| ||||| || || | ||||| ||||| ||||||||||| ||
Sbjct 269 ACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 317
>seq248
Length=442
Score = 95.1 bits (104), Expect = 1e-14
Identities = 117/158 (74%), Gaps = 4/158 (3%)
Strand=Plus/Minus
Query 25259 AAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAA 25318
|||||| || || || ||||| || || || ||||||||| | |||| | ||| ||
Sbjct 429 AAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAAAGATTGATTTTTGCCGGTAAG 370
Query 25319 CAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAAAAGAATCCACCATTC 25376
||||| ||||||| ||||| |||| | | |||||||||||||| || ||||| |||
Sbjct 369 CAACTAGAAGATGGTAGAACGCTGTCGG--ACTACAATATTCAAAAGGAGTCCACTCTTC 312
Query 25377 ATTTAGTGTTAAGATTGAGAGGAGGAAAATGATCATTC 25414
| | || || || ||||| || || || |||||| ||
Sbjct 311 ACCTTGTCTTGAGGTTGAGGGGTGGTAACTGATCAGTC 274
>seq9
Length=439393
Score = 89.7 bits (98), Expect = 5e-13
Identities = 153/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243
||||| || || || || || || | ||||| | ||||| ||| | || |||||
Sbjct 77160 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 77219
Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303
|| | || || ||| ||| || || || ||||| || || || || |||||| |
Sbjct 77220 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 77279
Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAA 25361
|| | | || || ||| | ||||| | ||||| |||| | | ||||| |||||||
Sbjct 77280 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTG--ACTACAACATTCAAA 77337
Query 25362 AAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|||||||||| | || ||||| || ||||||||||| ||
Sbjct 77338 AAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 77377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445091935289760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |