Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739825.1_202016-09- 21] 443 sequences; 12,174,042 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq5 248 1e-60 >seq5 Length=557070 Score = 248 bits (274), Expect = 1e-60 Identities = 867/1341 (65%), Gaps = 42/1341 (3%) Strand=Plus/Plus Query 104266 AGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACG 104324 ||| || || ||| || || || || || |||||| | || ||| || | ||||| Sbjct 293224 AGATATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTT-ACTCACG 293282 Query 104325 CAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTA 104384 | | ||||| | |||||||| ||||| |||| ||| ||||||||| ||| ||| | Sbjct 293283 CCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGG 293342 Query 104385 TCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAA 104444 | |||| ||||||||||| ||| | || || || | || | | ||| ||||| | Sbjct 293343 TTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGA 293402 Query 104445 TCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTC 104504 | || || ||||| |||||||| | || |||||| | | | | | | ||| Sbjct 293403 TTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCTT 293462 Query 104505 GTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACG 104564 ||| || ||||| ||| || | ||| | ||||| ||| |||| || || || Sbjct 293463 ACATTGCTGGTACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAATA 293522 Query 104565 CCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAGGGATCTA------TCGCAGTCT 104618 ||| || || ||||| | || | ||| | ||| || || | || | | Sbjct 293523 ACACTGCCCGTTATGTTGACCAGGGTGG---TAACAAGAGACCTGGTGCGTTTGCCCTTT 293579 Query 104619 ATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTG 104678 | || || |||||||| || ||||| | || || |||| | | ||||| ||| Sbjct 293580 ACCTGGAACCATGGCATGCTGATATATTTGATTTTATTGATATTAGGAAGAACCACGGTA 293639 Query 104679 ACGAGGAGGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATG 104737 | ||||| || ||| | ||| | ||| | ||||| |||||||| ||||| |||||| Sbjct 293640 AAGAGGAAATTCG-TGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATG 293698 Query 104738 AAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAG-GCACCTGGTCT 104796 ||| | || || || | ||| | ||| | | || | |||| ||| || |||||| | Sbjct 293699 AAGCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCA-ACATCAGCTCCTGGTTT 293757 Query 104797 CTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG 104856 |||| ||||| |||||||| || || || || |||||| |||||||||| Sbjct 293758 AAGCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCG 293817 Query 104857 GGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGA 104916 | | ||| | ||| | | ||| | | ||| | | ||||||| || Sbjct 293818 TGGTAA---GACTATCAAAGCCCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGA 293874 Query 104917 GACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAA 104976 ||||||||||| | | | ||||||| || || |||||| ||| ||||||||| || Sbjct 293875 AACTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAATCTAATCAAAAAAA 293934 Query 104977 TTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGA 105036 || ||||| |||||| || || | || ||||| | |||| ||| ||| Sbjct 293935 CTTAGGTGTCATCAAGTCATCAAACTTATGCTGTGAAATTGTTGAATACTCAGCTCCAGA 293994 Query 105037 TGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCC------------AAGTATGT 105084 ||| || ||||| |||||| | || || | || | || | | || Sbjct 293995 TGAAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGCATTCATTGAAACTTCTGA 294054 Query 105085 GGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCAC 105144 |||| |||| |||| | | ||||| | || ||| || | ||| ||| || Sbjct 294055 GGATGGTAAGACTTCCACATACAACTTCAAAAAATTACATGAAATTGCTAAAGTTGTTAC 294114 Query 105145 CAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATC 105204 || |||||||||| |||||| | |||| ||||| ||||| || | ||||| Sbjct 294115 TCGTAATTTAAACAGAGTCATTGATCGTAATTACTACCCTGTTGAAGAAGCGAGAAAATC 294174 Query 105205 TAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCT 105264 ||||||||||| | ||||||| | | |||||||| |||||||| || ||||| || Sbjct 294175 CAATATGAGACATAGACCAATTGCTTTGGGTGTTCAAGGTCTCGCTGACACTTTCATGCT 294234 Query 105265 TTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGAC 105324 | || |||||||||| || ||||| | ||| | || ||||| || Sbjct 294235 GTTACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTGCTAAATATCCAAATCTTTGAAAC 294294 Query 105325 CATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGA 105384 || ||||| ||| | | || || || || | || || || |||||||| || Sbjct 294295 TATTTATCATGCCTCCATGGAAGCTTCTTGTGAACTAGCTCAGAAGGACGGTCCATACGA 294354 Query 105385 AACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA 105444 ||| || | || ||||| ||||| ||||| | || || ||||||||||||| | | Sbjct 294355 AACTTTCCAAGGATCTCCTGCTTCTCAAGGTATACTACAGTTTGATATGTGGG-ACCAAA 294413 Query 105445 GACCAAGCTTCA-CTACGACTGGGAAGCTCTCAAGGAACG-CATCAAGGAGAAGGGTCTT 105502 ||| | || | || ||||| | || ||| || | |||| | || | ||| || Sbjct 294414 AACCCTACGGCATGTGGGATTGGGACAC-CTTAAGAAAAGATATCATGAAGCATGGTATT 294472 Query 105503 CGTAACAGTCTCCT----CATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGG 105558 | || |||| |||||| |||||||| || || ||||| | ||||| ||||| Sbjct 294473 AGAAA----TTCCTTGACCATGGCACCAATGCCTACTGCATCCACATCCCAAATATTGGG 294528 Query 105559 TAATAATGAATGCTTTGAACC 105579 | |||||||||| || ||||| Sbjct 294529 TTATAATGAATGTTTCGAACC 294549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257570193320