Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001739825.1_202016-09- 21] 443 sequences; 12,174,042 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq11 176 9e-39 seq12 163 6e-35 seq9 159 7e-34 seq70 141 2e-28 seq248 89.7 1e-12 >seq11 Length=648892 Score = 176 bits (194), Expect = 9e-39 Identities = 159/200 (80%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| |||||| ||| ||| ||||||||||||||||||| || || | || || || Sbjct 621603 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCC 621662 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || ||||||||||| | |||||||||| || ||||| |||||||||||| Sbjct 621663 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGG 621722 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | || || | || || ||||| |||| ||| ||||| | |||||| |||||| Sbjct 621723 ATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTA 621782 Query 283071 CCCGTCAAAGTCTTAACGAA 283090 || ||||||||||||||||| Sbjct 621783 CCAGTCAAAGTCTTAACGAA 621802 >seq12 Length=1051691 Score = 163 bits (180), Expect = 6e-35 Identities = 153/195 (78%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||| | | || | ||||| || | ||| || || ||||| Sbjct 496178 TTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 496119 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | |||||||||| |||||||| ||||||||||||||||| | || || | Sbjct 496118 GATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 496059 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| |||| ||| ||||| || || || |||||||| || |||||||| || Sbjct 496058 GTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGAC 495999 Query 283088 GAATATCTGCATTTT 283102 ||| || ||||| || Sbjct 495998 GAAAATTTGCATCTT 495984 Score = 156 bits (172), Expect = 9e-33 Identities = 152/193 (79%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966 ||| ||||||||||||||||||| |||| || | || || ||||| || || ||||||| Sbjct 63194 TTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCTAGCTGCTTACCGGCAA 63252 Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 ||||||| | ||||| || || ||||| |||||||| ||||| || | || ||| Sbjct 63253 AGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGT 63312 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 ||||||| ||||| || | ||| || || | |||||| || ||||| ||||||||||||| Sbjct 63313 TATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAA 63372 Query 283087 CGAATATCTGCAT 283099 | || |||||||| Sbjct 63373 CAAAGATCTGCAT 63385 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || | || || |||||||| ||| || || || |||||||| |||| Sbjct 63386 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 63445 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| | || || ||||| || || |||||||||||||| | |||||| || || Sbjct 63446 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 63505 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| ||||||||||| || || | || ||| | ||||| || || |||| ||| || Sbjct 63506 GATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 63565 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | || || || ||||| ||||||||||| ||||| |||||||| Sbjct 63566 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 63613 Score = 138 bits (152), Expect = 2e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| || |||||||| | ||||| | ||||| |||||||| || |||||||| Sbjct 62967 TCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAA 63026 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | ||| ||||| |||||||| ||||||||||| || || | || ||| | Sbjct 63027 ATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTG 63086 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || |||||||| |||| ||| || || || || || ||||| || || | ||| || ||| Sbjct 63087 TCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACG 63146 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 63147 AAAATTTGCAT 63157 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| || |||||||| | ||||| | ||||| |||||||| || |||||||| Sbjct 62718 TCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAA 62777 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015 ||||| | ||| ||||| |||||||| ||||||||||| || || Sbjct 62778 ATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTT 62824 >seq9 Length=439393 Score = 159 bits (176), Expect = 7e-34 Identities = 154/195 (79%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTG 282955 || || ||| ||||||||| ||||||||||||| |||| || | || || || | ||| Sbjct 77353 TGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATTG 77295 Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015 || || ||||||||||| | |||||||||| || ||||| ||||||||||| ||||| Sbjct 77294 CTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTT 77235 Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 || || || | || |||||||| |||| ||| ||||| | |||||| |||||||| || Sbjct 77234 TGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGT 77175 Query 283076 CAAAGTCTTAACGAA 283090 ||||||||| || || Sbjct 77174 CAAAGTCTTGACAAA 77160 >seq70 Length=593 Score = 141 bits (156), Expect = 2e-28 Identities = 146/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| || |||||||| | ||||| | ||||| |||||||| || |||||||| Sbjct 85 TCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAA 144 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | ||| ||||| |||||||| ||||||||||| || || | || ||| | Sbjct 145 ATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTG 204 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || |||||||| |||| ||| || || || || || |||||||| |||| ||||| || Sbjct 205 TCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACA 264 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 265 AAAATTTGCAT 275 Score = 129 bits (142), Expect = 1e-24 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966 ||| ||||||||||||||||||| |||| || | ||||| |||||||| || || |||| Sbjct 312 TTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCATCTTCTAGTTGCTTACCAGCAA 370 Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 | ||||| | ||||| || || ||||| || || ||||| ||||| ||| ||| Sbjct 371 AAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATCTTACTTTTGACGT 430 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 | || |||||||| |||| ||| || || || || || ||||| || || | ||| || | Sbjct 431 TGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGA 490 Query 283087 CGAATATCTGCAT 283099 |||| || ||||| Sbjct 491 CGAAAATTTGCAT 503 >seq248 Length=442 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| || |||||||| | ||||| | ||||| |||||||| || |||||||| Sbjct 323 TCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAA 382 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015 ||||| | ||| ||||| |||||||| ||||||||||| || || Sbjct 383 ATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTT 429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046733258773722